Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g01342 ATGGAAGGGAGGGGTTTTTCTGGCTTATACAATAATACAAGTGAAGAGTTGTTCCTGAAGACAGTGATGGAGAGTCCTATTGGTATGCCAGTACCTACCATGGAGATGTTGGGCTTCAAGAATGTTTCTCAAAGCTTTCGCACAGATAGTGAGGAGCTTTTCAAACGTTGGCTAACAAATGGAGAGGGATACAATTCATCAAGCATAGGACTCAATAGTCGATTATCAACGAGGATGTCCACTGAACTATCTAATGTGACTAATCAGCAACATGTTGGTGTAGCTTCAGAGGGAAGAAACAATGATAAATCATTCATACAAAATAACCTTTTGACCAATGATGTTGCAAATGATTTCAATTTTCCAATCAGAGATCCTGCTGATAGAGAACTGCAATCTGGTAACTTGTTTCTGGCCAAGGCCTGGTTTCTTAGTGATCAACGAATGACAAGAAGCCGGTCCTCTGAATTGCGGCGGAGATATACTGAAATGCAAAATGCTCAAGCAACACAAGGAATGGAATCCATGTGCACGGCTCCTCAGCATCACGGTACTGACACTACAATACAAGAAGTTACAAATTTAAATGGTTTTGATTACCTTTCTATGTGTGAGCTTCCAAGTCAAAAGGGTTCATTCATGTCTCCATGCAACTCATCTTCATCTACATTCAACACACATCAATTGGGTGATACAGATAAAGTTTCATCTTGTGTGAGTATGCTAAAAGGTACATTACAACGCAAGAGACTCAGCAGCCAAGTTGAGAAAGAAGCTGTAGAAGATAGCTTACATGGACTTCTTCTTCCTCAAGAACCTCTTTTCCAAACTGGTCTTAGTGAAGGACAAGAAAATTGGAATTATCAAAAGCCAGTAAATGTTCATGAAGCCTCTATTGGTCAAGTTAAAGATCCTGAAGTCATGCAAACAATTGAAGGATCCATGAACCTTGTCTTGGATGGTTTTGCCAATCAGACAAACCAAATATATTTTGGAACAACTTCCCGAGAACCTTCTCAAAGTGAATCCTCTGCTGCTGCACCAGTAATCTCCTCTACTTTAGATGCATGTGAAGGTCCCAGCAATTCAAATCAAACTCTTTGTGAAAGCTCATGGAAACAAGTGGGAGTGAGTAGAAGTTCAGAAAATACTCAAAATAGAGTCAAAGGTATAAATATTACATCAGGCCGGCCCAATCATTGGACAAGTTTCAGAGAACAGATAATGGATAATTTGAAAGATGATAGGAAGAGGAGAAGTCTAGAAAGATATGGATCTGTCAAATCAACTGTTTCAGATGATAAGGTGGACACCACAAAAAAGCGTAGGGTGGAGCGCTCAAGGAAAATGGCTGAGGCAAAGGAAAGAAATTTAACACCATCAGTTCCTTCAGATATGCAAGCTGTGTTGAAGCGGTGTGAAAATCTTGAGAAGGAAGTTCGATCACTAAAACTTAATTTGTCCTTCATGAATAGGAAGGATTCTGAACAAACAAAGCAGATAGAGGACCTTCAGAAGCAGAATGAAGAATTGGCAGATGAAAAAGAACGCCTCCTAGAAGAGATTGAAAGAATTATATCAGAAACTGGAAAGTTCTAA 1599 0.3952 MEGRGFSGLYNNTSEELFLKTVMESPIGMPVPTMEMLGFKNVSQSFRTDSEELFKRWLTNGEGYNSSSIGLNSRLSTRMSTELSNVTNQQHVGVASEGRNNDKSFIQNNLLTNDVANDFNFPIRDPADRELQSGNLFLAKAWFLSDQRMTRSRSSELRRRYTEMQNAQATQGMESMCTAPQHHGTDTTIQEVTNLNGFDYLSMCELPSQKGSFMSPCNSSSSTFNTHQLGDTDKVSSCVSMLKGTLQRKRLSSQVEKEAVEDSLHGLLLPQEPLFQTGLSEGQENWNYQKPVNVHEASIGQVKDPEVMQTIEGSMNLVLDGFANQTNQIYFGTTSREPSQSESSAAAPVISSTLDACEGPSNSNQTLCESSWKQVGVSRSSENTQNRVKGINITSGRPNHWTSFREQIMDNLKDDRKRRSLERYGSVKSTVSDDKVDTTKKRRVERSRKMAEAKERNLTPSVPSDMQAVLKRCENLEKEVRSLKLNLSFMNRKDSEQTKQIEDLQKQNEELADEKERLLEEIERIISETGKF* 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g01342 532 MobiDBLite consensus disorder prediction 420 459 - -
Rops1g01342 532 MobiDBLite consensus disorder prediction 420 455 - -
Rops1g01342 532 PANTHER PROTEIN CYCLOPS 1 531 IPR040036 GO:0005634|GO:0036377|GO:0043565
Rops1g01342 532 Coils Coil 466 528 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g01342 Rops-Chr1 30098346 30104025 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g01342 - - gmx:100811742 781.171
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops1g01342 1 30098346 30104025 Rops1g01342 1 30098346 30104025 ECH