Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g01314 ATGGGATCTTTCAAGGGTCATGCTTTGCCAGGGACATTGTTTTTTGTAGTTGGGGTATGGCATATATGGGCCTCTGTGGTGAGATACTTTCAAAATCCTAAGACATTTCAAGTCCGGGTCTGGAATCCTGTACCAGGGTTTAATGGGAGGCTCAAGCACTTGGAGCTCTATGTTATTGCAATTGGTGCTTTTATTGACATGTGTATTGAGCTCTTATATTCAACCCATCTCAAGTTATTTGTCGGTGGTGTCCTTAACCCCTCTCACATGAATGACTTTGAGCATGGTGGAATGCTTCTTATGTTTTTCATCTTTGGTGTTGTTGCCCTACTTACCGATAAGACCAGATTTCTTCCCTTGCCGGATGGTTCTCTTTGTTTGATTGCTGCCACAGCATTCTGTGCAGAGTATCTTCTATTCTACTTTCATTCAACAACACATAAGGGCCTTGAGGGCTATTACCACACCCTCCTTGTCTTCCTAATAGGGCTGTGTGTTCTATCTTCAATTGCTGGAGCCCTTTTGCCAACAAGCTTTCCAGTGGATTTATGTAAAGGCATTGCTATAGCACTGCAAGGCATCTGGTTCTATCAAACAGCCTTTGTTCTTTATGGTCCCATGTTACCAGATGGTTGTAAGCTTAAGGATAATAATATCATGTGTCATTCAGCTGAGAGTGAAGTTAGGGGTGAATTGCTTGCTAACTTTCAGCTCTTTGTTGCTGTCCTTGTGGTCCTCATAGGAACTGTAGCATCCTATGTCTTTGCAGCTTCAAGATATGGGAATTCTCAAGTTAATAGCTTGCACACAATTCAGGATGGATTAGAACAAAACTGA 837 0.4217 MGSFKGHALPGTLFFVVGVWHIWASVVRYFQNPKTFQVRVWNPVPGFNGRLKHLELYVIAIGAFIDMCIELLYSTHLKLFVGGVLNPSHMNDFEHGGMLLMFFIFGVVALLTDKTRFLPLPDGSLCLIAATAFCAEYLLFYFHSTTHKGLEGYYHTLLVFLIGLCVLSSIAGALLPTSFPVDLCKGIAIALQGIWFYQTAFVLYGPMLPDGCKLKDNNIMCHSAESEVRGELLANFQLFVAVLVVLIGTVASYVFAASRYGNSQVNSLHTIQDGLEQN* 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g01314 278 Pfam Family of unknown function (DUF716) 123 254 IPR006904 -
Rops1g01314 278 Coils Coil 265 278 - -
Rops1g01314 278 PANTHER PLANT VIRAL-RESPONSE FAMILY PROTEIN 1 269 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g01314 Rops-Chr1 29585957 29589853 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g01314 - - gmx:100807467 498.434
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops1g01314 1 29585957 29589853 Rops1g01314 1 29585957 29589853 ECH