Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g01310 ATGTCGTCTAAGGTTGTGTACGAAGGGTGGATGGTTCGTTATGGCCGGCGAAAGATCGGGCGATCGTTCATCCACATGAGGTACTTCGTGCTTGAATCGCGATTGCTCGCATATTACAAGAGAAAACCGCAGGATAATCAGGTTCCTATAAAAACATTGCTAATTGATGGCAACTGTAGAGTGGAGGATAGAGGCTTGAAGACCCATCATGGACATATGGTTTATGTTTTGTGTGTTTACAACAAGAAAGAAAAGTACCATCGAATTATGATGGCAGCCTTTAACATCCAAGAGGCCCTAATATGGAAGGAGAAAATTGAGTATGTCATTGATCAGCATCAGGGAGCTCAACCATCAAATGGTAACAAATATATTTCTTTTGAGTACAAATCTGGGATGGACAATGGGAAGACGGCTTCTTCCTCAGACCGTGAAAGCCAATTCAGTGCTCAGGAAGATGAAGATGAGCCTCCTCCAAATTTGTTAAGGAGGACAACAATAGGAAATGGTCCTCCGGAATCAATTTTTGACTGGACACGAGAGATAGATTCAGATTTGTCAAATCAGAATATCAATAACCAAGCATTCTCAAGAAAGCATTGGCGTCTTTTACAGTGTCAAAATGGACTTCGTATTTTTGAAGAACTTCTTGAAGTTGATTACCTTCCAAGAAGCTGTAGTAGAGCTATGAAGGCTGTAGGTGTTGTGGAGGCCTCTTGTGAAGAAATTTTTGAGCTTGTGATGAGCATGGATGGGACACGGTTTGAATGGGATTGCAGTTTCTCACATGGTAGTTTAGTTGAGGAGGTGGATGGGCATACGGCTGTTCTTTATCACCGACTTCAGCTGGACTGGTTCCCAATGTTTGTGTGGCCGCGTGATCTTTGTTATGTACGTTACTGGCGCCGAAATGATGATGGAAGTTATGTTGTTTTATTTCGCTCTAGGGAACATGAGAATTGTTGTCCACAACCAGGGTGTGTTCGGGCACATATTGAGAGTGGAGGATTTAATATTTCCCCCTTAAAACCTCGAAATGGGAGGCCTAGGACACAAGTCCAGCATCTTATGCAGATTGATCTGAAGGGATGGGGTGTGGGTTACGCATCATCTTTTCAGCAGCATTGTCTCCGCCAAATGTTAAATAGTGTGGCTGGTTTACGTGAATGGTTTGCCCAAACAGATGAAAGGAATGCTCCACCACGAATTCCTGTGATGGTTAATATGTCCTCAACATCTGTTTCTTCGAAAAGTCAGAAGCCAAATGAATTTTCTGTTAATCCTAATTCTCTCGATCATACAAACGCCGCAAGCAGAAATTCTGCTATGTTGGATGAATATTCTGATGAAGATGAAGATTTTCAAATAGCGGAACCTGAGCTAGAGGCATTCCAAAATGGTCGAGAGAATGATGTGAGAAAAACAGCCTTGGAAGAAGAACCGGCAAATGAGATTGACTTATCTTCCTTCTCGGGTAATTTACGCCGAGATGATCGTGATAATGCTCGGGACTGCTGGAAAATTTCTGATGGAAATAACTTCAGAGTCAGAAGCAAGCATTTTTGCTATGACAAATCAAAGGTTCCTGCGGGCAAACATCTCCTGGATCTTGTTGCTGTTGATTGGTTGAAGGACTCAAAAAGAATGGACCATGTGGCTAGGCGTCATGGTTGTGCCGCACAAGTTGCATCAGAAAAAGGATTTTTCTCCTTTATCATTAATCTTCAAGTGCCTGGATCAACACACTACAGTATGGTATTCTATTTTGTGACAAAGGAGTTAGTTCCCGGATCCCTCTTGCAACGCTTTGTTGATGGTGATGATGAATTCCGAAACAGCAGGTTTAAGCTCATCCCATCAGTCCCAAAGGGCTCATGGATTGTACGGCAAAGTGTTGGGAGCACACCTTGTTTACTGGGAAAGGCAGTTGATTGCAACTATATTCGTGGTCCCAAGTATTTAGAAATTGATGTCGATATTGGTTCTTCTACTGTTGCTAATGGAGTTTTGGGGCTGGTTATTGGTGTGATTACAACATTGGTGGTTGATATGGCTTTTCTTGTGCAGGCAAATACTCCTGACGAGTTGCCCGAGAGGCTTATTGGAGCTGTTCGAGTATCTCATTTAGAGCTCAAATCTGCCATGGTCCCAAATCTGGATCCAGATACATCATGA 2175 0.4276 MSSKVVYEGWMVRYGRRKIGRSFIHMRYFVLESRLLAYYKRKPQDNQVPIKTLLIDGNCRVEDRGLKTHHGHMVYVLCVYNKKEKYHRIMMAAFNIQEALIWKEKIEYVIDQHQGAQPSNGNKYISFEYKSGMDNGKTASSSDRESQFSAQEDEDEPPPNLLRRTTIGNGPPESIFDWTREIDSDLSNQNINNQAFSRKHWRLLQCQNGLRIFEELLEVDYLPRSCSRAMKAVGVVEASCEEIFELVMSMDGTRFEWDCSFSHGSLVEEVDGHTAVLYHRLQLDWFPMFVWPRDLCYVRYWRRNDDGSYVVLFRSREHENCCPQPGCVRAHIESGGFNISPLKPRNGRPRTQVQHLMQIDLKGWGVGYASSFQQHCLRQMLNSVAGLREWFAQTDERNAPPRIPVMVNMSSTSVSSKSQKPNEFSVNPNSLDHTNAASRNSAMLDEYSDEDEDFQIAEPELEAFQNGRENDVRKTALEEEPANEIDLSSFSGNLRRDDRDNARDCWKISDGNNFRVRSKHFCYDKSKVPAGKHLLDLVAVDWLKDSKRMDHVARRHGCAAQVASEKGFFSFIINLQVPGSTHYSMVFYFVTKELVPGSLLQRFVDGDDEFRNSRFKLIPSVPKGSWIVRQSVGSTPCLLGKAVDCNYIRGPKYLEIDVDIGSSTVANGVLGLVIGVITTLVVDMAFLVQANTPDELPERLIGAVRVSHLELKSAMVPNLDPDTS* 725
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g01310 724 MobiDBLite consensus disorder prediction 135 174 - -
Rops1g01310 724 SUPERFAMILY Bet v1-like 185 364 - -
Rops1g01310 724 PANTHER ENHANCED DISEASE RESISTANCE-RELATED 21 719 IPR045096 -
Rops1g01310 724 MobiDBLite consensus disorder prediction 413 435 - -
Rops1g01310 724 Pfam START domain 227 370 IPR002913 GO:0008289
Rops1g01310 724 SUPERFAMILY PH domain-like 2 120 - -
Rops1g01310 724 Gene3D - 201 401 IPR023393 -
Rops1g01310 724 Gene3D - 1 120 IPR011993 -
Rops1g01310 724 ProSiteProfiles START domain profile. 201 383 IPR002913 GO:0008289
Rops1g01310 724 SMART PH_update 5 113 IPR001849 -
Rops1g01310 724 CDD START 193 364 - -
Rops1g01310 724 ProSiteProfiles PH domain profile. 4 111 IPR001849 -
Rops1g01310 724 SMART START_1 181 393 IPR002913 GO:0008289
Rops1g01310 724 Pfam Protein ENHANCED DISEASE RESISTANCE 2, C-terminal 506 709 IPR009769 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g01310 Rops-Chr1 29469694 29484223 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g01310 - - gmx:100806401 1365.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops1g01310 1 29469694 29484223 Rops1g01310 1 29469694 29484223 ECH