Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g01307 ATGGTTTTATCCACCACCACGATTCTCTCTTTTTCTCCATTTCCAACTCTCTCTCCACCAACTTCAACGGTTGTAAAGTTGGAAACTTTTTCACTAAAAAATGGTGGGGTTATCAGAAATGGAGGAATTAATGGTTCTTCAATGGCACCCAGAAATCGAGAATTAGCAACTTGTTCTGTTTCTGGAGATGACAATGCTGCTGTTACTGATGTGCCTTTCCCTACTGATTATTCTGAACTTCTAGAACAAGCTAAAGTTGCAATGGAATTGGCTATGAAGGATAACAAACAGCTAATGGAGATTGAGTTTCCCACAGCTGGACTCGCTTCTGTACCAGGTGATGGTGAAGGTGGAATAGAGATGACTGAAAGCATGCAATTGATTCGTGAATTTTGTGACCGCTTCATTAGTTCAGAAAAGGCCACACGAACCAGAATATTTTTTCCAGAGGCTAGCGAAGTTGACTTTGCAAGACAATCAGCCTTTAGTGGAGCTTCTTTAAAGTTGGACTATCTGACAAAGCCTTCATTTTTTGAAGATTTTGGTTTTGTCAAAAAAGTTAAAATGTCAGACAGAGTGAAGCCAGGAGATGAACTTTTCTTGGTTGCCTACCCATATTTTAATGTCAATGAAATGCTTGTTGTGGAAGAACTTTACAAAGAGGCGGTCTTGAACACCGAACGGAAACTGATTATTTTCAATGGGGAACTTGATCGAATAAGATCTGGGTATTATCCACCATTCTTCTACCCAAAGCTTGCTGCACTTACCAAGTCCTTGCTACCTGTGATGGAAACTGTGTATTACATTCATAATTTCAAGGGCCTAAAAGGAGGAACACTTTTCAGGTGCTATCCAGGACCCTGGAAGGTCCTCAGAAGAGTGGGGAGTAGTAAATATGCTTGTCTGCATCAGCAGGATACCATGCCATCCCTCAAGGAAGTTGCCCTTGAGATTCTTCCAGCAACTTGA 972 0.4115 MVLSTTTILSFSPFPTLSPPTSTVVKLETFSLKNGGVIRNGGINGSSMAPRNRELATCSVSGDDNAAVTDVPFPTDYSELLEQAKVAMELAMKDNKQLMEIEFPTAGLASVPGDGEGGIEMTESMQLIREFCDRFISSEKATRTRIFFPEASEVDFARQSAFSGASLKLDYLTKPSFFEDFGFVKKVKMSDRVKPGDELFLVAYPYFNVNEMLVVEELYKEAVLNTERKLIIFNGELDRIRSGYYPPFFYPKLAALTKSLLPVMETVYYIHNFKGLKGGTLFRCYPGPWKVLRRVGSSKYACLHQQDTMPSLKEVALEILPAT* 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g01307 323 Coils Coil 81 101 - -
Rops1g01307 323 PANTHER PROTEIN LOW PSII ACCUMULATION 3, CHLOROPLASTIC 46 322 IPR044687 -
Rops1g01307 323 Pfam Domain of unknown function (DUF1995) 74 316 IPR018962 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g01307 - - gmx:100805878 528.094
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops1g01307 1 29459713 29462840 Rops1g01307 1 29459713 29462840 ECH