Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g01296 ATGAATCGCCACCACGATCCCAATCCATTCGACGAAGAAGAAGTCAACCCTTTCTCGAATGGTGCTGCTGCTCCTGGAAAATCACGTATTCCACCAGTAGGCTTTGGTCAAAAACATGATGCTACAGTTGATATTCCTTTGGATGCTACAAATGACTCTAAGAAAAAAGGTCAAGAGCTAGCAGCTTGGGAGGCTGATTTAAAAAGGAGAGAAAAGGAAATAAAAAGAAGAGAAGATGCTGTTTCTAGAGCCGGTGTACCTGTTGATGATAAGAATTGGCCTCCATTTTTTCCAATCATTCACCATGACATCACCAATGAGATACCAGTTCATGCTCAGAGGCTGCAATATTTGGCCTTTGCAAGCTGGTTAGGAATTGTTCTCTGCCTAGTTTTTAATGTAGTTGCTGTGATTGTCTGTTGGATCAGAGGAGGCGGTGTTAAAATTTTTTTCCTTGCGGTGATTTATGCTCTACTTGGCGTTCCCCTTTCATATGTGCTTTGGTACAGGCCTCTCTATCGTGCTATGAGGACGGATAGTGCACTGAAGTTTGGTTGGTTTTTCATGTTCTACTTGCTTCATATAGCATTTTGCATCTTTGCTGCAATTGCACCTCCAGTTGTTTTTCATGGAAAATCATTAACAGGAATCCTTGCAGCCATTGATGTCTTCTCAGACCATGTATTGGTTGGGATATTCTATTTGGTTGGATTTGGCCTGTTTTGCTTGGAGTCTCTTCTAAGCTTTTGGGTGCTTCAGAAAATATACATGTATTTCCGGGGGCATAAGTGA 792 0.4179 MNRHHDPNPFDEEEVNPFSNGAAAPGKSRIPPVGFGQKHDATVDIPLDATNDSKKKGQELAAWEADLKRREKEIKRREDAVSRAGVPVDDKNWPPFFPIIHHDITNEIPVHAQRLQYLAFASWLGIVLCLVFNVVAVIVCWIRGGGVKIFFLAVIYALLGVPLSYVLWYRPLYRAMRTDSALKFGWFFMFYLLHIAFCIFAAIAPPVVFHGKSLTGILAAIDVFSDHVLVGIFYLVGFGLFCLESLLSFWVLQKIYMYFRGHK* 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g01296 263 MobiDBLite consensus disorder prediction 1 39 - -
Rops1g01296 263 PANTHER SECRETORY CARRIER-ASSOCIATED MEMBRANE PROTEIN SCAMP 5 262 IPR007273 GO:0015031|GO:0016020
Rops1g01296 263 Coils Coil 60 80 - -
Rops1g01296 263 Pfam SCAMP family 91 261 IPR007273 GO:0015031|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g01296 Rops-Chr1 29361864 29369212 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops1g01296 1 263 Miscellaneous Gene Families AT1G32050 75.940 1.50e-152 424
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g01296 K19995 - gmx:100780723 493.041
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops1g01296 1 29361864 29369212 Rops1g01296 1 29361864 29369212 ECH