Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g01289 ATGAACGATAGCGACGACATTTTATTCGAAGAATGGGAAGACGCCATGCTTGTCCAGTTAATTCAAGTCGAAGAGCTTGCTTTCTCTTCAATCGCCAAAACACAACAACCCCACAACAGTAACCCTTCTTCTTATCAACCTCAACCTCAACCCCAACAACAACAACAACCTCTTCCTTCGTTCTCTCCTCCACGAGAGCTTTCTCAGAGGACAACCCATTTCGACCCTCCAAAACCCCATTCCGATAAAGACCTCGAAATTGAGCACTTAAAGAAGGAGCTGGGACGTGCGTCAAAGCAGATTGCAAGTCTGGAAAAGGAGTGTCTCAAGTTAAAGAAAGAAAGAGACAAGAAAGAGGATCGCCCCAAATTTGTATCTTCCGAGAATCAAGAAGAAAATGCCTGTAGTAAATGTTCAAAAAGTACAGACAAGGATTTTGGAATTCTTGCTCCTGACCATCATAAAATCTCTTCAAAATTTAAAAATGGAGTATCTTCAGACGATCCAACTGTTGAGACAACTTCTAAAGCTAAAGGAGTTGAAACAGAAAGGGTTAGACATCAAGAAGCTCAAGGTTCTCCAAGTAATGATCAGTCTGCTTATCTTGACCTCTCCCAGAAGTTGCTGGCAGTATGGGGATCTCCAACTGACAAAAAGCTTGGAAATATAAGCTCTTCAAGAGCATCTTTGCATTGTGTCAAGGATTGTTTCCGAACTCCAGAAGCAGCAAAGGTGTCACATCTCTACCTGGCATTGACAAAGGTGGCTGATGGAACAGATGTGTTAGAAACTTTGATAGAACCGTTGCTTGATGTCTGTGGTATGGAAAATGTTGTTATTGTCCACAGCTCTCTATGTATACTGCATACTCTTCTGAAGCTCCTACTGGAATTGGAAAAGAATTTTGGAAGAAGGGACAATGTCTTCGTTGAAGGAATTTGCGTTGGGAAGGATCTTGTGGATTCTATTGGATTGGAAGGTGTGAAAGATGGAAAGCTCTCCAATGAAGAAACACTAAGCAAAAAAGAGTGCTGGAACCATCAAAATGCCTTACAACGTCATGTAAATTGGTCTTGTCTTTTTGAGATGATGCATCAGATTGCCATGAGGATCACAGAAGAAAGCGTAAGAGTGGAGGCCGCATCCATTATGAAGCTGCTTCTCCTGAGGAGTAATGCTTACTTTGAGAGGGAGCAGTTTAGCCAGAAAATTGTTTTTAAATCTATTTCAGAATTGCTTAAGGATGCTGGGCTGCATGTAAAAAAGCATGCTCTAAGACTTCTGTACCTAGCACTAAATTGTCCAAAACTGTTGGCCACTTTCTGCAGTGGTTGCAAAGAGGGGGATGATAGTGGTGCTATGGATGACAATGCATCTGCTTCAGATTATCAAAATTTTAAAACCATCCTTCAAGGATTGGCTGATTGTGTAGCATCTTGTAGAGGTGGTGTACTGGAGTTGAAAATAAGCAGAAATGCTATTCTTGTGCTGGCATTCCTCGCATCGTCGGGACAACCTGGTTTTGAAATCCTCGTTGGTCACAGGCTCTCTACTAGAGGGGCAAACTATCTTATGTTGATTTTGCAATTGCTGGTATCAGAGATGGACCTTGAAGCTGGGGCACACAATGAGCTGCCAGAAGTTTTTAGGGAGAGGACATTTCTGATACGGGAGATACTGATATTACTCAACAGACTAGTGTCTAGTCCTTCATATTCTGCCACTGTGTTGCGTGGTTTAACGCACACTAGGGATATGGCTGGTTTGACAATTGATGTTGCTAGCAGATTATCTCGGAAAGGAAAGAAAAATGAGCAGCAGGACAGCATGGTGAAGCATATAAGAGAAAATGAAATCGTTGACCTTGCTCGCCTGTTCAAGAAAAGGGTATTCACATACTTAGGAGATGACTTATTATGA 1920 0.4198 MNDSDDILFEEWEDAMLVQLIQVEELAFSSIAKTQQPHNSNPSSYQPQPQPQQQQQPLPSFSPPRELSQRTTHFDPPKPHSDKDLEIEHLKKELGRASKQIASLEKECLKLKKERDKKEDRPKFVSSENQEENACSKCSKSTDKDFGILAPDHHKISSKFKNGVSSDDPTVETTSKAKGVETERVRHQEAQGSPSNDQSAYLDLSQKLLAVWGSPTDKKLGNISSSRASLHCVKDCFRTPEAAKVSHLYLALTKVADGTDVLETLIEPLLDVCGMENVVIVHSSLCILHTLLKLLLELEKNFGRRDNVFVEGICVGKDLVDSIGLEGVKDGKLSNEETLSKKECWNHQNALQRHVNWSCLFEMMHQIAMRITEESVRVEAASIMKLLLLRSNAYFEREQFSQKIVFKSISELLKDAGLHVKKHALRLLYLALNCPKLLATFCSGCKEGDDSGAMDDNASASDYQNFKTILQGLADCVASCRGGVLELKISRNAILVLAFLASSGQPGFEILVGHRLSTRGANYLMLILQLLVSEMDLEAGAHNELPEVFRERTFLIREILILLNRLVSSPSYSATVLRGLTHTRDMAGLTIDVASRLSRKGKKNEQQDSMVKHIRENEIVDLARLFKKRVFTYLGDDLL* 640
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g01289 639 MobiDBLite consensus disorder prediction 162 176 - -
Rops1g01289 639 MobiDBLite consensus disorder prediction 32 91 - -
Rops1g01289 639 MobiDBLite consensus disorder prediction 110 127 - -
Rops1g01289 639 MobiDBLite consensus disorder prediction 71 91 - -
Rops1g01289 639 SUPERFAMILY ARM repeat 252 449 IPR016024 -
Rops1g01289 639 Coils Coil 87 121 - -
Rops1g01289 639 PANTHER ATR INTERACTING PROTEIN 224 636 IPR044952 GO:0006974
Rops1g01289 639 MobiDBLite consensus disorder prediction 32 51 - -
Rops1g01289 639 MobiDBLite consensus disorder prediction 110 140 - -
Rops1g01289 639 MobiDBLite consensus disorder prediction 158 198 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g01289 Rops-Chr1 29293997 29303139 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g01289 - - gmx:100817091 811.986
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops1g01289 1 29293997 29303139 Rops1g01289 1 29293997 29303139 ECH