Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g01287 ATGGCTGCTCTGCAATACTTGGATTCGTTGCGCAACGCGCACCCTGAGCTCTCTGATTGGTACAATTCGCTTGCGGATCTGTACGAGAAGAAACTCTGGCACCAGCTCACTCTCAAGCTTGAACAGTTCGTCGCTCTTGCTGTCTTCCAGGCTGGTGATGCTCTGATACAGTTATATCACAATTTCATCACTGATTTCGAGACCAAAATCAACCTTCTCAAGCTTGCACATTTTGCTGTGATGGTTTCTCGGCAGTATTCTGAGAAAGAAGCTGCTGTTGGTTATCTTGAAGGGGTCATTGAGAAACTGCAAGCCACTAAAGAGCAGCGCATAGAAGAACCTATTCTATACACTAAGATGCAAATAGCCTTATTTAAGCTTGAGCAAGGTGACCAAAAGGAATGCAAGAAACTTCTAGAAGATGGAAAGAGTACACTAGACAGCATGACAGATATTGATCCAACTGTGTATGCTAGCTATTATTGGGTATCTTCTCAGTATCACAAGTCCCGCCAGGAATTTGCTGAGTTCTACAAAAGTGCTCTTCTCTATTTGGCTTACACATCGGTGGAGTCTCTCTCAGATTCGTTCAAGCTGGATTTGGCATTTGATTTGTCCCTTTCTGCTCTGCTGGGGGATAACATCTACAACTTTGGAGAGCTACTTGCCCATCCTATTATTAAGAGCCTTCTGGGGACAAAGGTAGAATGGCTTTACTATATTATGCAGGCATTCAATTCTGGTGATTTAGTTCGATATCAAGAATTATGTCGGGTGCATAATACTGCTTTAAGGGCTCAACCAGCACTAGTTCAAAATGAACAGAAGTTATTGGAAAAGATCAACATTCTCTGTCTGATGGAGATTATATTCAGCCGGCCTTCGGAAGATCGAACTATTCCCTTGGGTGTAATTGCAGAACGTACAAAACTTTCTATAGAGGATGTGGAGCATCTCCTTATGAAGAGCCTATCTGTTCATCTAATTGAGGGTATAATCGATCAAGTTGAGGGCACGGTGCATGTTTCCTGGGTGCAGCCAAGAGTTCTTGGTATTCAACAGATCAAATCTTTACGGGATCGGCTGGACAGTTGGACAGGAAAAGTACACACCGCGTTGTTGTCCATCGAGGCAGAAACACCTGATCTAATTGGATCATGA 1161 0.4332 MAALQYLDSLRNAHPELSDWYNSLADLYEKKLWHQLTLKLEQFVALAVFQAGDALIQLYHNFITDFETKINLLKLAHFAVMVSRQYSEKEAAVGYLEGVIEKLQATKEQRIEEPILYTKMQIALFKLEQGDQKECKKLLEDGKSTLDSMTDIDPTVYASYYWVSSQYHKSRQEFAEFYKSALLYLAYTSVESLSDSFKLDLAFDLSLSALLGDNIYNFGELLAHPIIKSLLGTKVEWLYYIMQAFNSGDLVRYQELCRVHNTALRAQPALVQNEQKLLEKINILCLMEIIFSRPSEDRTIPLGVIAERTKLSIEDVEHLLMKSLSVHLIEGIIDQVEGTVHVSWVQPRVLGIQQIKSLRDRLDSWTGKVHTALLSIEAETPDLIGS* 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g01287 386 ProSiteProfiles PCI domain profile. 174 347 IPR000717 -
Rops1g01287 386 Gene3D - 206 343 - -
Rops1g01287 386 SUPERFAMILY "Winged helix" DNA-binding domain 275 348 IPR036390 -
Rops1g01287 386 FunFam 26S proteasome non-ATPase regulatory subunit 13 homolog B 174 373 - -
Rops1g01287 386 PANTHER 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 13 4 384 IPR035298 -
Rops1g01287 386 Pfam PCI domain 239 343 IPR000717 -
Rops1g01287 386 SMART motif in proteasome subunits, Int-6, Nip-1 and TRIP-15 272 365 IPR000717 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g01287 K03039 - gmx:100804455 707.983
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops1g01287 1 29252002 29258287 Rops1g01287 1 29252002 29258287 ECH