Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g01265 ATGGATCGTGGAAATGTTGGTGAAGCCATTAAGCAAAATCATGGCATAGGTTTAGATTATTTTACTAAACCTGTAAATGGAAAATTGGATTTGGATTCCGTACAGAAGATGTTTCTTAAGGGAATGAGTAGTTTCAGCATTACTGATTCTAATATAGTTAAGATTTATCGTTGCTCAAGTACATCAATGCAAGCGCGATTGGAGCTATTCCAGAAGCAAGTTGAAATTACAAAAAAATATCATGGGGATGCTAATGTTCGATATGCTTGGCTTGCTTCTTCTAAAGGAGAACTACCTACAATGATGGAGTATGGGCTTGGTCATTGTGGACTATCTCCATCTCAATGCACATACGGCATTGGTGTTCATCTTGCAGCTGTTACCTGCCCTTACACCAGTGCACGTTATTGTGATGTTGACGAAAATGGGGCTCGACACTTGGTCTTGTGTCGTGTGGTAATGGGAAATATGGAACTTCTCCATCGTGGGACTTGTCAGTTTCATCCCAGCAGCTCTGAATATGATAATGGGGTGGATGATATTCATTGTCCAAAATACTATGTAGTATGGAATATGAATATTAACACCCATATTTATCCAGATTTCGTGGTTAGTTTCAAGGTCGCTTTGGATTTTGAAGCCCATTTTAGTGGAAACAAGAATATCAATGTTTATGGGGTTAATAATCATAGACCCTATGATCTGTATCGATCAGACTCTTCTACAGTGGATACTGGAAAAGCTACAAGTATGATTGCTAGTACTCGAGAAAGTCCAAAAATCCCTTGGATTCCTTTTGATATCCTTCTCGATACTATCAAAAACAAGGTTACTTCTGAGAAAATGGCTCTTATCAATGTGCTTTATGAACAATTCAGGTCAAAGAAGATTTCCCGTGAATATTTAGTAATGAAGCTAAGGTTGATAGTTGGCGATGCTTTGTTGAGAAAAACATTTTCAGATTTTCAATCCAAGGTAGCAGACATATGGTGA 993 0.3797 MDRGNVGEAIKQNHGIGLDYFTKPVNGKLDLDSVQKMFLKGMSSFSITDSNIVKIYRCSSTSMQARLELFQKQVEITKKYHGDANVRYAWLASSKGELPTMMEYGLGHCGLSPSQCTYGIGVHLAAVTCPYTSARYCDVDENGARHLVLCRVVMGNMELLHRGTCQFHPSSSEYDNGVDDIHCPKYYVVWNMNINTHIYPDFVVSFKVALDFEAHFSGNKNINVYGVNNHRPYDLYRSDSSTVDTGKATSMIASTRESPKIPWIPFDILLDTIKNKVTSEKMALINVLYEQFRSKKISREYLVMKLRLIVGDALLRKTFSDFQSKVADIW* 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g01265 330 PANTHER INACTIVE POLY [ADP-RIBOSE] POLYMERASE SRO4-RELATED 27 325 IPR044964 -
Rops1g01265 330 ProSiteProfiles RST domain profile. 257 328 IPR022003 -
Rops1g01265 330 Pfam RCD1-SRO-TAF4 (RST) plant domain 258 323 IPR022003 -
Rops1g01265 330 SUPERFAMILY ADP-ribosylation 32 232 - -
Rops1g01265 330 Pfam Poly(ADP-ribose) polymerase catalytic domain 33 169 IPR012317 GO:0003950
Rops1g01265 330 ProSiteProfiles PARP catalytic domain profile. 8 234 IPR012317 GO:0003950
Rops1g01265 330 Gene3D - 26 209 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g01265 Rops-Chr1 28930916 28933530 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g01265 - - gmx:100800707 450.669
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops1g01265 1 28930916 28933530 Rops1g01265 1 28930916 28933530 ECH