Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g01262 ATGTCGATAAAAACTGTTAAAGTCAGTAATGTTTCCTTGGGAGCAACTGAACGAGACATTGAGGAGTTCTTTTCTTTTTCTGGTGATATTGAATATGTTGAACTGCAGAGTCATGATGAACGATCTCAAATTGCTTATGTTACCTTCAAGGATTCACAGGGAGCTGAAACGGCAGTACTGCTATCGGGAGCAACCATAGTTGATATGTCAGTTACAATAACCCTGGATCCAGATTACCAGCTTCCACCCGCTGCCTTGGCGTCATCTGTGAAAGAAAGGGAAACTACTGGTGGCTCTGAATCTGCTTTTCGGAAGGCAGAAGATGTGGTCTCTGGAATGCTAGCCAAGGGCTTTATTTTAGGGAAAGATGCTGTCAACAAAGCAAAGACTTTTGATGAGAAGCACCAATTATCCTGGACAGCCTCAGCAAAAGTTGCATCTTTTGACCAGAAAATTGGGCTTAGTGAGAAATTTAGTGCTGGTGCTTCCGTTGTGAGCGATAAAGTTCGAGAAGTAGATCAAAAGTTTCAGGTTTCAGAGAAGACGAAATCAGCATTTACAGCTGCAGGACAGCAAGCCAGTAATGCTGGTTCTGCCATAATGAAGAATCGCTATGTACTTACTGGGGTCTCCTGGGCAACAGGTGCTTTTAGTAAGGTTTCTAAGGCAGCTGGGGAAGTAGGTCAGAAGACAAAAGAGAAAGTGGAGAATTCAGAACAGCAACAGAAGTGA 732 0.4331 MSIKTVKVSNVSLGATERDIEEFFSFSGDIEYVELQSHDERSQIAYVTFKDSQGAETAVLLSGATIVDMSVTITLDPDYQLPPAALASSVKERETTGGSESAFRKAEDVVSGMLAKGFILGKDAVNKAKTFDEKHQLSWTASAKVASFDQKIGLSEKFSAGASVVSDKVREVDQKFQVSEKTKSAFTAAGQQASNAGSAIMKNRYVLTGVSWATGAFSKVSKAAGEVGQKTKEKVENSEQQQK* 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g01262 243 PANTHER SERINE/ARGININE-RICH SPLICING FACTOR 4 242 - -
Rops1g01262 243 FunFam RNA recognition motif-containing protein 1 74 - -
Rops1g01262 243 Gene3D - 2 74 IPR012677 -
Rops1g01262 243 SMART rrm1_1 5 74 IPR000504 GO:0003723
Rops1g01262 243 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 4 78 IPR000504 GO:0003723
Rops1g01262 243 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 7 66 IPR000504 GO:0003723
Rops1g01262 243 SUPERFAMILY RNA-binding domain, RBD 3 76 IPR035979 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g01262 Rops-Chr1 28881370 28885095 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g01262 - - gmx:100809613 408.297
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops1g01262 1 28881370 28885095 Rops1g01262 1 28881370 28885095 ECH