Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g01233 ATGGAGAACTCCGCCACCACATCGGAGCAAGATTCCTACGAGAAGCACCCGACGCAGCACCACCTGGTGCTCCCGTCGGGTCTCACATCCGACGAGTTCGAAACCCTAATCCCTTCCGTGAAGGAGCACCACACCTACCTCATAGGCCCCGGCCAATGCTCCACCCTACTCGCGCAGCGAATCCACGCTCCGCCGGAAACCGTCTGGTCCGTCGCCCGGCGATTCGACAAGCCACAAAGCTACAAACACTTTATCAAAAGCTGCGCAGTCAAAGAAGGTTTCCAAATGACCGTAGGGTGCACCAGAGACGTCAATGTAATCTCCGGCTTGCCGGCGGCGACAAGCACCGAGAGACTCGACATACTCGATGATGAACGGCGCGTCACCGGATTCAGCATCATCGGTGGAGAGCACCGACTCAGGAATTACAGCTCCGTCACCTCCGTTCACGGCTTCGAAGAGGGCGACGGTGAGATCTGGACGATTGTTCTGGAATCTTATATAGTGGATGTTCCAGAAGGTAACTCGCAAGAGGACACGCGTCTCTTTGCTGATACTGTTGTGAAGCTGAACCTTCAGAAGCTCGCTTCTGTCACCGAAGGGAAGAACCGTGACGGTGACGGTAAGTCACCCTCGGTGTGA 642 0.5592 MENSATTSEQDSYEKHPTQHHLVLPSGLTSDEFETLIPSVKEHHTYLIGPGQCSTLLAQRIHAPPETVWSVARRFDKPQSYKHFIKSCAVKEGFQMTVGCTRDVNVISGLPAATSTERLDILDDERRVTGFSIIGGEHRLRNYSSVTSVHGFEEGDGEIWTIVLESYIVDVPEGNSQEDTRLFADTVVKLNLQKLASVTEGKNRDGDGKSPSV* 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g01233 213 SUPERFAMILY Bet v1-like 53 198 - -
Rops1g01233 213 CDD PYR_PYL_RCAR_like 53 200 - -
Rops1g01233 213 Pfam Polyketide cyclase / dehydrase and lipid transport 59 199 IPR019587 -
Rops1g01233 213 PANTHER - 57 197 - -
Rops1g01233 213 Gene3D - 12 212 IPR023393 -
Rops1g01233 213 FunFam Abscisic acid receptor PYR1 16 208 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g01233 Rops-Chr1 28316906 28317889 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g01233 K14496 - gmx:100788576 332.028
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops1g01233 1 28316906 28317889 Rops1g01233 1 28316906 28317889 ECH