Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g01121 ATGGTGCCTGAGTGGGAGAAAGCCTACATGGGCTATGAAGGCCTCAAGAAAATATTGAAAGAGGTCAAAAACAGCAAGCAAGTTACACAAAATAGTTCCTTGCCGCACAAATTCAGCCTTGAAAGAGCATTCAGTGGAATACACTTGCATGGTAGCAATCATCAGAGAGAGGGGGATACTGAAGACCTGGTTATAGATGTTAAGACACTAGAGGGAGATGGTTCCAAACAGTTATACAAGACCAACTTTCAAAAGTGCCATGAAGAAGGAGGAGAGGCTGAGGCAAGATTCTTTCAGAAGCTTGATGAAGAGCTCAACAAGGTCAATGCATTTTACAAGGATCAGGTGGAGACAGCCAAGCATGAAGAAACCCTTTTGAGTAAACAAGTTGAGGCTTTAGTTGCATTGAGGGTTAAGGTGAAAAACCCTGATCAAGGATTGAAGCAGATTGGTTCATCAACTGAAGAGAACATGGATCAAAATCGTCAGCAAAAAGATTCTATGGGAGACCCTGAAGTTGATCCTGTTCAACAGGCCAATAGAAATACTCATCATGAGGAGGAAGCACACAATAATTACAAAACAAGAGATCCAATGGAAATCCTTGAGCATGTAAAGATTGATAATGCTCTTCAATCTCCAATATCAACAATTAAAAGTTTTTTTACAGATTCCAATAATAATAATGAATTAAGCTTCAACAAAGATGAGCTGAGAAAAATTGAAGGGCAACTGAGACTAGTGTTTATTGAGTTCTACCAGAAACTCCATCATCTCAAAGATTACAGTTTTATAAACCTCTCGGCATTTTCCAAGATCATGAAGAAGTATGAAAAGATTACATCAAGAGCAGCATCTAAAGCATACATGAGAGTAGTGGATAACTCCTATCTGGGCAGTTCTGATGAGGTTAATTTTCTTTTGGAGAAGGTGGAGTCTACCTTCATCAGGAACATTGCACATTCAAATCACAGAAAGGGAAGGAAATTATTAAGGCCAAAAATGAAAAGAGAAAGGCATAGCATAACATTTTTTACAGGTTTCTTTTCTGGTTGTTTTGTTGCTCTACTAGTTGCTACTACATTAAGAATGGTATCTCAACATTTAATGCAGAAGCAAGTGGGGACATTTTACATGGAAAACATTTTCCCACTATACAGGCCTGGAACTGAGTTGGACCATAGAGATGTATTCCTTCTGACCACTGGTCATGCAGTGGTAGCAGTACTATGTTTCTTGATAAATTTGCAGCTGGAGATGAACCAAAAGATTAGAAGCTATAAGACAGCCACTGAACTTGTTCCTCTGAGCTTAGTTGTTCTTGTTCTTTTGATCACCTTTTGCCCTTTCAACATCATATACCGTTCAAGTCGTTTCTTCTTTATCAAGTGTTTATTTCGCTGCATATGTGCTCCTCTTTTCCCGGTTACACTTCTAGATTTTTTCTTGGCTGATCAGCTAACTAGCCAGTTCCAAGCCTTCAGGAGTTTTGTGCTTTACATATGCTATTATGGCCTGGGAGAACACTCAAGGAGGCAAAAGAAATGTCAAAGTCATGGTTTCTATAATGTACTGTATTTCATTGTTGGCGCCATTCCTTACTGGTTTCGCCTGGCACAGTGCATGCGTCAATTGTATGATGACAGAGATATCAGTCATGCAGTCAATGGTTCAAAGCATCTCTCAACAATGGTTGCTATGGTCATGAGAACTGCCTTTGAAATAAAGAAAGGAAGGACATGGAAAGTGTTGGCACTTATCAGTTCAGCTGTATCAGTATTGATGAATACATATTGGGACATTGTCAAGGACTGGGGGTTTCTTCAAAGGCATTCAAAGAACCCTTATTTGAGGGATAAACTCATAGTTCCACACAAAAGTGTCTACTTCATAGTCATGGTCCTGAATGTACTTCTTAGACTTTCCTGGATGCAGCTGGTGCTTGAACTGAATTGGCGCCTCATTCATAGAGTGGCAATCATTACATTTATTTCCTGCCTTGAAATTATTCGTCGTGGCATTTGGAACTTCTTTAGATTGGAGAATGAACACTTGAACAATGTTGGAAACTACCGTGCCTTCAAGTCTGTCCCTCATCCTTTCAGTTACTATGATGAAGAAAATGACAAAGATGACTAG 2139 0.3936 MVPEWEKAYMGYEGLKKILKEVKNSKQVTQNSSLPHKFSLERAFSGIHLHGSNHQREGDTEDLVIDVKTLEGDGSKQLYKTNFQKCHEEGGEAEARFFQKLDEELNKVNAFYKDQVETAKHEETLLSKQVEALVALRVKVKNPDQGLKQIGSSTEENMDQNRQQKDSMGDPEVDPVQQANRNTHHEEEAHNNYKTRDPMEILEHVKIDNALQSPISTIKSFFTDSNNNNELSFNKDELRKIEGQLRLVFIEFYQKLHHLKDYSFINLSAFSKIMKKYEKITSRAASKAYMRVVDNSYLGSSDEVNFLLEKVESTFIRNIAHSNHRKGRKLLRPKMKRERHSITFFTGFFSGCFVALLVATTLRMVSQHLMQKQVGTFYMENIFPLYRPGTELDHRDVFLLTTGHAVVAVLCFLINLQLEMNQKIRSYKTATELVPLSLVVLVLLITFCPFNIIYRSSRFFFIKCLFRCICAPLFPVTLLDFFLADQLTSQFQAFRSFVLYICYYGLGEHSRRQKKCQSHGFYNVLYFIVGAIPYWFRLAQCMRQLYDDRDISHAVNGSKHLSTMVAMVMRTAFEIKKGRTWKVLALISSAVSVLMNTYWDIVKDWGFLQRHSKNPYLRDKLIVPHKSVYFIVMVLNVLLRLSWMQLVLELNWRLIHRVAIITFISCLEIIRRGIWNFFRLENEHLNNVGNYRAFKSVPHPFSYYDEENDKDD* 713
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g01121 712 Pfam EXS family 349 685 IPR004342 GO:0016020
Rops1g01121 712 ProSiteProfiles EXS domain profile. 517 711 IPR004342 GO:0016020
Rops1g01121 712 ProSiteProfiles SPX domain profile. 1 291 IPR004331 -
Rops1g01121 712 Pfam SPX domain 1 292 IPR004331 -
Rops1g01121 712 PANTHER XENOTROPIC AND POLYTROPIC RETROVIRUS RECEPTOR 1-RELATED 388 706 - -
Rops1g01121 712 MobiDBLite consensus disorder prediction 145 176 - -
Rops1g01121 712 CDD SPX_PHO1_like 1 287 IPR034092 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g01121 Rops-Chr1 26372254 26378216 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g01121 - - gmx:100795093 1124.38
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops1g01121 1 26372254 26378216 Rops1g01121 1 26372254 26378216 ECH