Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g01091 ATGAAACTCAACTTTTCCTTTCTGTGCAAGCTTTTGATACTGCAATATCTATCAGTTCAATGCCTTGCTCAGGAATTTGATTTCTTCTATTTTGTTCAGCAGTGGCCAGGAGCATACTGTGACACGAAACAAAGTTGCTGTTATCCGAAAACTGGAAAACCTGCAGCAGATTTCGGCATTCATGGACTCTGGCCTAACCACAATGATGGTTCATGGCCCTCAAACTGTGATCCTGACAGTGTCTTTGATAAATCTCAGATCTCAGACCTCATTAGGAGCATGGAAAAGGATTGGCCATCACTGAGCTGCCCGAGTAGCAATGGTATGAGGTTTTGGTCACACGAATGGGAGAAACATGGTACCTGTGCAGAATCTGAGCTTGATCAGCGTGATTACTTTGAAACAGCTCTTAAACTGAAGCAGAAAGTGAACCTCCTTCAGATACTCAAGAATGCAGAGATTGAACCAGATGATGGATTTTACAGCCTAGAAAGCATTTCAGAGGCTATTAAAGAAGGTACTGGGTTTACACCAGGGATAGAGTGTAACAAAGATTCAGCCAAAAACAGCCAGCTTTACCAAGTTTACATGTGTGTGGACACTTCTGGATCAAATTTCATTGAGTGCCCTTTGCTTCCAAGGAGCAGATGTGGTTCAGAAATACAATTCCCCAAGTTTTAA 681 0.4229 MKLNFSFLCKLLILQYLSVQCLAQEFDFFYFVQQWPGAYCDTKQSCCYPKTGKPAADFGIHGLWPNHNDGSWPSNCDPDSVFDKSQISDLIRSMEKDWPSLSCPSSNGMRFWSHEWEKHGTCAESELDQRDYFETALKLKQKVNLLQILKNAEIEPDDGFYSLESISEAIKEGTGFTPGIECNKDSAKNSQLYQVYMCVDTSGSNFIECPLLPRSRCGSEIQFPKF* 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g01091 226 CDD RNase_T2_euk 26 223 IPR033697 -
Rops1g01091 226 ProSitePatterns Ribonuclease T2 family histidine active site 2. 111 122 IPR033130 -
Rops1g01091 226 FunFam Ribonuclease 3 20 226 - -
Rops1g01091 226 Gene3D - 20 226 IPR036430 GO:0003723|GO:0033897
Rops1g01091 226 Pfam Ribonuclease T2 family 26 209 IPR001568 GO:0003723|GO:0033897
Rops1g01091 226 PANTHER RIBONUCLEASE T2 19 219 IPR001568 GO:0003723|GO:0033897
Rops1g01091 226 ProSitePatterns Ribonuclease T2 family histidine active site 1. 58 65 IPR018188 GO:0003723|GO:0033897
Rops1g01091 226 SUPERFAMILY Ribonuclease Rh-like 20 225 IPR036430 GO:0003723|GO:0033897
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g01091 Rops-Chr1 25462634 25463946 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g01091 K01166 - gmx:100778239 442.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops1g01091 1 25462634 25463946 Rops1g01091 1 25462634 25463946 ECH