Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g00992 ATGGAGTTTTTCAGCAAAACCAAGGTGGTGAAGCTTCGGAGCCACCTAGACAAGTACCTAATCGCCGACGACAACGGTGAAAAAGTCCGTCAGAGCCGTAACGGTTCTGTTAGGAGAGCTCAATGGACGGTGGAGGCAGTGGACGAGAAAAACCACCTTGTGCGGTTAAAGAGTTGCCACGGAAAATACCTAACGGCAACGGAGACGGCGTTTCTGTTAGGGATGACGGGGAAGACGGTTATCCAAACGGACGTTATAGATGGGAAGAACGAGTGGGAACCGATACGCGATGGGTTTCAAGTGAAGTTGAGGAGTTGGTCGGGGAAATACCTGAGGGGAAACGGTGGAACGCCGCCATGGAGGAACACGGTGACGCACGATGATCCACATGGTTCTGCAACGGAGAATTGGGTTTTGTGGGATGTTGAAGCTGTGGTGGATGAGGAAATGAATAATGAGTTCTCTGAGAGCGTTAAATCATCTTTTGCTTCTGATGAGCTTTCCGCCGGTTCCGACCCGGCGTCGCCGATGTCTGTTTTCTCTCTCTCGTCGCCGACGGCGAGACGGAACTTTCAGACAATGAACGCCAACAAGTTCAGAAATGGAATAGACTTTTTCCACGGTGCCAAGGCGGTGCGCCTCCGCAGCCACCTCGAGAAGTACCTGCTAGCGGAGGAAGATGAAGAATCGGTGACCCAAGACCGAAACGGATCCTCCAAGAGTGCACGATGGGTCGTGGAATTCGTCCCCGAATACGACAACATTATTCGCCTCAAAAGCTGTTACGGCAAGTACCTCACCGCCTCCGACCACCCCTTTTTGCTTGGCATGACGGGTCGCAAGGTGCTTCAGACACTTCCCTCGACGGTCGATTCCTCGGTTGAATGGGAACCCATCAAAGATGGTGGTCGTGTCAAACTCAAGACACGTTATGGTAACTTCCTCAGAGCCAATGGTGGTTTGCCACCTTGGAGGAACACCGTTACTCATGATATTCCACAGAGAACCGTAACGCAGGATTGGATTTTATGGGATGTTGATGTTATGGAGATTCAAGCTCAGAAACAACAACCGTCAGCTCAGAAACAACAACCTTCAGCTCAGAAACAACAACCTTCAGCCCCACCCTTGTCACTTTCTGATTCCGTTAGCATGCCATCACCTGTGGTACCCACCATATCTGCTAGCTTTTCAAGGCAACAGTCGAATGATTTGAGTGTTGGTTCGTCACCGAGGGTGGAGGGGAGAATTATATACTACCATGTTGCTGAAGATGATGGAGTGGTGAGTGATGAAGGTTTGCCGGGGTATTGTTTGACTTTCAAGGGGAATGGGGTTGAAGAATTGACTAGGAAGGTTGAGGAAGAGACAGGGCTAGAGGGAATCATTGTGTGTAATCGGAGTCCTTTTAATGGAAAGCTTTATCCTCTTCGTTTGCAGCTTCCTCCAAATAATGCGACCATGCAGGTTGTTTTGGTTCTTCCCTTTTCAAAAGTGGCAAGAGACTTTGAGGCACAAGGTTTGCTGTGA 1530 0.4974 MEFFSKTKVVKLRSHLDKYLIADDNGEKVRQSRNGSVRRAQWTVEAVDEKNHLVRLKSCHGKYLTATETAFLLGMTGKTVIQTDVIDGKNEWEPIRDGFQVKLRSWSGKYLRGNGGTPPWRNTVTHDDPHGSATENWVLWDVEAVVDEEMNNEFSESVKSSFASDELSAGSDPASPMSVFSLSSPTARRNFQTMNANKFRNGIDFFHGAKAVRLRSHLEKYLLAEEDEESVTQDRNGSSKSARWVVEFVPEYDNIIRLKSCYGKYLTASDHPFLLGMTGRKVLQTLPSTVDSSVEWEPIKDGGRVKLKTRYGNFLRANGGLPPWRNTVTHDIPQRTVTQDWILWDVDVMEIQAQKQQPSAQKQQPSAQKQQPSAPPLSLSDSVSMPSPVVPTISASFSRQQSNDLSVGSSPRVEGRIIYYHVAEDDGVVSDEGLPGYCLTFKGNGVEELTRKVEEETGLEGIIVCNRSPFNGKLYPLRLQLPPNNATMQVVLVLPFSKVARDFEAQGLL* 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g00992 509 PANTHER ACTIN CROSS-LINKING PROTEIN (DUF569) 204 493 - -
Rops1g00992 509 FunFam BnaC05g19630D protein 207 347 - -
Rops1g00992 509 Pfam Domain of unknown function (DUF569) 204 344 IPR007679 -
Rops1g00992 509 Pfam Domain of unknown function (DUF569) 1 140 IPR007679 -
Rops1g00992 509 Gene3D - 5 144 - -
Rops1g00992 509 SUPERFAMILY Actin-crosslinking proteins 207 348 IPR008999 -
Rops1g00992 509 Gene3D - 211 329 - -
Rops1g00992 509 SUPERFAMILY Actin-crosslinking proteins 7 142 IPR008999 -
Rops1g00992 509 MobiDBLite consensus disorder prediction 354 386 - -
Rops1g00992 509 FunFam BnaC05g19630D protein 5 143 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g00992 Rops-Chr1 23446110 23453160 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g00992 - - gmx:100811752 711.835
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops1g00992 1 23446110 23453160 Rops1g00992 1 23446110 23453160 ECH