Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g00977 ATGATGGAACAGTCACCATTCACCACTCCAAGAGGATCACTTTCATCAAGCATTGGAGACTCTGCAGAACTTGAGGCCAATCTCACACTCAGCGAAAGGCTCAAGGTTTTCAAAAGTTCCTCCTTTGATCCCAATGCCTTTGTCGCCTCCAAATCCCGCAGCATGAACGAAAAGGAGATAAGGCACTTGTGCGCTTATCTTGTTGACCTGAAGAAGGCTTCTGCAGAAGAAATGCGCAAAAGTGTTCTTGCCAATTACTCTGCCTTCATACGTACATCCAAAGAGATTTCAGATCTTGAGGGGGAGCTGCTTTCCATGAGAAATCTTTTATCCACTCAGGCTGCTTTGGTTCATGGTTTAGCAGAAGGGGGTCAGCTTAGTTCCTTGATGACTGGAAATGAAGATTCAGACATGGATGATATACTAAATGAGAAAACAGACATATCGAAAACAGAAAAATGGCTAATAGGATTTCTAGAAACACTTGACGTTCTATTAGCAGAGAAAAGAGTGGATGAAGCAATGGCTGCCTTGGATGAAGGAGAAAAAATGGCAAAAGAAATTAGTGAAGGGAAAACTTTGAGTCCAAGTTTATTCCAGGCATTGGAAGAAGCCATTACTGAACACAGACAAAAACTAGCTGATCAGCTAGCAGAAACTATCTGCCAGCCATCAACTCGGAGTGCAGAGATTCGCTCAACAGCATTGGCATTGAAAAATCTAGGGGATGGTCCTCGTGCTCATACATTATTACTTAATTCTCACAAAGAAAAGTTGCATCGTAACATGCAAAGTCTTAATTCCTCCATTTATGGTGGAGTTGGGGCATTCACTACTGCCCTTTCACAGCTTGTCTTTTCAACCATTTCACAAGCAGCTTCAGATTCTTTGACAGTGTTTGCTGAAGAAGAAGCTGCATATACTTCTGAGCTAGTAACTTGGGCAGTTACAATGGCTGACCATTTTGCTCTTCTCCTTAAGAAACGTATTCTTGCCTCAACTGCTGCTGCGGGAGGTCTGAGAGTTGCATCTGAATGTGTTCATGTTTGCTTGAGTCACTGTCAGGTGTTGGAGGCTAGTGGGCTGGCCCTTTCTCCTGTCTTACTAAAACATTTTAGACCCTTTGTTGAGCAAGCACTGAATACAAATTTAAAAAGAATCGAGCAAAGTAGTGCTGCACTGGCTGCTGCAGAAGATTGGTTGCTTGCTTATGCACCAACCCAGAGCAGGAATTCTGGCCTACCTCCAGTTTCTTCCATTACTAACTTAAGTTCATTCCAGCCAAAACTTTCAAGCAGCGCTCACAAATTCAACTCAATGGTTCAGGAGCTTTTCGAAGATGTAGGACCTCTTGAAGCCCTACAATTGGATGGTCTTGCATTTGAAGGCCTTCTACAAGTGTTCAACTTCTATGTCAACTTGTTAATAAATGCAGTGCCAGGTTCAATGGTAACTGAGAACTTGGAAGGCTCAGGGCACAAAATTGTTAAGATTGCTGAGACTGAAGCACAGCAGATAGCATTGCTGGCTAATGCAATATTGCTAGCAGATGAGCTGCTCCCGCGTGCTGTTGTCAAGCTTTCACATAGCACCAGAGGTGATGAATCTCAGAGAAGAGGATCAGACAAACAAAGGCCTCCAGAACAGCGTGAACTGAAGAAAAGGCTCCAGCGTGAAGTTGATCGTCTAAGAGACAGCTTCTGCCGGCAACATGCTCTTGAACTCATCTTTACAGAAGAAGGGGACACAATTCTGAATGCACAAATGTATTTGAGTATGGATGGCAAAGTGGACCAACCTGAATGGTTTCCTTCTCCAATTTTTCAGGAGGTTTTTGCAAAGCTTACACGAGTGGCAAGCATTGCAACAGATGTGTTTGTGGGAAGGGAAAGATTTGCCACTGTTTTATTGATGAGACTTGCAGAAACAGTGATCCTGTGGCTTTCTGATGACCAAGCCTTCTGGGAAGATATTGAGACAGGCCAAACGCCTTTGGGTCCTCTCGGCCTTCAACAGCTTTATTTGGATATGCAATTTGTGATGATATTTTCATCCCAAGGCCGTTACTTATCTCGTCATCTGCATCAAGCTATTAAAAACATTATTGCTAGGGCTATTGAGGCTGTTGCTGCTACAGGGCTAGATCCCAACAGTGTCTTGCCAGAGGATGAGTGGTTTGTTGAAGTTTCTGAAATAGCTATAAAGTTGTTGACTGGGAAAGCTGCCTTTGACAATGTAGAGGGAGATGTTAATAGCCCCACTGCATCCTTCGGAGCATAA 2280 0.4351 MMEQSPFTTPRGSLSSSIGDSAELEANLTLSERLKVFKSSSFDPNAFVASKSRSMNEKEIRHLCAYLVDLKKASAEEMRKSVLANYSAFIRTSKEISDLEGELLSMRNLLSTQAALVHGLAEGGQLSSLMTGNEDSDMDDILNEKTDISKTEKWLIGFLETLDVLLAEKRVDEAMAALDEGEKMAKEISEGKTLSPSLFQALEEAITEHRQKLADQLAETICQPSTRSAEIRSTALALKNLGDGPRAHTLLLNSHKEKLHRNMQSLNSSIYGGVGAFTTALSQLVFSTISQAASDSLTVFAEEEAAYTSELVTWAVTMADHFALLLKKRILASTAAAGGLRVASECVHVCLSHCQVLEASGLALSPVLLKHFRPFVEQALNTNLKRIEQSSAALAAAEDWLLAYAPTQSRNSGLPPVSSITNLSSFQPKLSSSAHKFNSMVQELFEDVGPLEALQLDGLAFEGLLQVFNFYVNLLINAVPGSMVTENLEGSGHKIVKIAETEAQQIALLANAILLADELLPRAVVKLSHSTRGDESQRRGSDKQRPPEQRELKKRLQREVDRLRDSFCRQHALELIFTEEGDTILNAQMYLSMDGKVDQPEWFPSPIFQEVFAKLTRVASIATDVFVGRERFATVLLMRLAETVILWLSDDQAFWEDIETGQTPLGPLGLQQLYLDMQFVMIFSSQGRYLSRHLHQAIKNIIARAIEAVAATGLDPNSVLPEDEWFVEVSEIAIKLLTGKAAFDNVEGDVNSPTASFGA* 760
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g00977 759 Gene3D - 273 378 IPR042560 -
Rops1g00977 759 MobiDBLite consensus disorder prediction 530 555 - -
Rops1g00977 759 SUPERFAMILY Cullin repeat-like 145 380 IPR016159 -
Rops1g00977 759 Gene3D - 142 264 IPR042561 -
Rops1g00977 759 FunFam Exocyst complex component EXO84B 142 265 - -
Rops1g00977 759 Pfam Exocyst component 84 C-terminal 153 364 IPR032403 -
Rops1g00977 759 PANTHER EXOCYST COMPLEX COMPONENT 8 12 756 IPR033961 GO:0000145|GO:0006887
Rops1g00977 759 Coils Coil 199 219 - -
Rops1g00977 759 Pfam Vps51/Vps67 37 115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g00977 Rops-Chr1 23239120 23245694 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g00977 K19986 - gmx:100818886 1204.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops1g00977 1 23239120 23245694 Rops1g00977 1 23239120 23245694 ECH