Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g00948 ATGGACACAACAGAGCAAAGGCGAAAGAGGAAGAGAGTTGTGGTGGGGAGGCACCTTCATATTTCATCAAGGTCAATTTTTCTTTGCTTCTCCTTCATCATCTTCCTCCTCTTCTTGTCCAACCACCATGAATTCTTCACCTCCTCCACCTTCAGACCACCTCTCTCAGCCTCAACCCTATCCCTTCTCTACTCCTCTGCAAGCAATTCCATTCTTGACCCTCTTCACACCACCAACCCCACCTCCTCTTTCACCCTCCAACACCATATCCTATTCCCTGACCACCACCTTCTCACCCTCACCAACCACCAAAAAAACCAACTTTACCCTCCCCATGAACTAGAGTGTGTCTACTACTCTACCATCCTCACCAACGGTTCAGCTTCCGGTTCATCTGAACCGGTCCTTGATGTTCAGGTTAAACCGGTTCTGTCCACGGACCGGTATGATGAATCTCGATCCATAGCCAGGTGCCCATTTCTCCAGACGAGCTACTCCGCCGGCGGGGCCCCTAAAGTTGTCGACTTGCGGCGGCGCGGCGAGGTGGGTCACCGGAGTTTTGGTTTTTTGATGAACCAAACGGCTCAATCTTGGGAAAGGGTGGCGTATGAGGCGAGCTTGGATGGGAACACGGTTGTGGTGTTTGTGAAAGGGCTGAATCTGCGACCCCACAAGATCTCGAATCCGACCCATTTCCGGTGCCATTTCGGGTTGAAGAGTTTCCACAAAGATGGTGCCTTTTTGCTTAGTACCAGAGCGGTTTCGGTGGCTCAAGAAGTTGTGAGGTGTATGTTGCCACAGAGCATAAGGAACAACCCGGTTAAGGCTCGAGGGATTAGGGTCACTGTGAGTCATTTGAGTGGCAATGTGAGACACCCGGTTCGTACCCTTGTGCCATCAGTGGCTAAAGTTGGAAGCCCTGATGGTGGTGAAGCTAGAGTCCAGAGGAGGAATAGGCACAAGCATGAGCTTTGTGTGTGTACCATGGTGTGGAACCAAGCTTCTGCTCTTAGGGAATGGGTTATGTACCATGCCTGGCTTGGAGTGGAGCGTTGGTTTATCTACGATAACAATAGTGATGATGATGTTGAAAAGGTTATTCAGGATCTTGACCATCAAGGTTACAATGTTAGTAGACAGGCCTGGCCTTGGATTAAGACTCAAGAAGCAGGGTTTTCTCACTGTGCTTTGAGGGCTAGAGAGGAGTGTAAATGGGTGGGGTTCTTTGATGTTGATGAGTTCTTCTACTTCCCCAATGAGTTTCGTCACCAGATAGGGGAGGGTGTTCCCGGTGAGAATTCTCTGAAATCGGTGGTTGCCAATTACTCATCTTCAGCATCAATTGCAGAGATAAGAACAGCTTGTCATAGCTTTGGACCTTCTGGGTTGAACTTGCCTCCTAAACGAGGGGTTACTATAGGGTACACATGCCGGCTTCAGAGCCCTGAGCGGCACAAATCCATTGTGAGGCCAGATTTGCTTGATGAAAGTCTTCTGAATGTGGTGCACCATTTTCGGCTGAGGGAGGGGTACACGTACCACAACATGCCTGAAGGTACTGCTATAGTAAACCACTACAAGTACCAGGTATGGGAGACCTTCAAAGCCAAGTTCTTCAGAAGGGTTGCTACCTATGTTGTTGACTGGCAGGAGGATCAAAACAAAGGATCAAAGGATAGAGCACCGGGACTTGGAACAGAAGCCATTGAACCACCTAATTGGCGTTTACAATTTTGTGAGGTTTGGGATACTGGCTTGAAAGACTTCCTTCTGTCTTATTTTGCAGATCCTGCAACAGGGTTGATGCCCTGGGAAAGGTCATCTCTATAA 1830 0.4896 MDTTEQRRKRKRVVVGRHLHISSRSIFLCFSFIIFLLFLSNHHEFFTSSTFRPPLSASTLSLLYSSASNSILDPLHTTNPTSSFTLQHHILFPDHHLLTLTNHQKNQLYPPHELECVYYSTILTNGSASGSSEPVLDVQVKPVLSTDRYDESRSIARCPFLQTSYSAGGAPKVVDLRRRGEVGHRSFGFLMNQTAQSWERVAYEASLDGNTVVVFVKGLNLRPHKISNPTHFRCHFGLKSFHKDGAFLLSTRAVSVAQEVVRCMLPQSIRNNPVKARGIRVTVSHLSGNVRHPVRTLVPSVAKVGSPDGGEARVQRRNRHKHELCVCTMVWNQASALREWVMYHAWLGVERWFIYDNNSDDDVEKVIQDLDHQGYNVSRQAWPWIKTQEAGFSHCALRAREECKWVGFFDVDEFFYFPNEFRHQIGEGVPGENSLKSVVANYSSSASIAEIRTACHSFGPSGLNLPPKRGVTIGYTCRLQSPERHKSIVRPDLLDESLLNVVHHFRLREGYTYHNMPEGTAIVNHYKYQVWETFKAKFFRRVATYVVDWQEDQNKGSKDRAPGLGTEAIEPPNWRLQFCEVWDTGLKDFLLSYFADPATGLMPWERSSL* 610
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g00948 609 PANTHER UNCHARACTERIZED 27 598 - -
Rops1g00948 609 Pfam Glycosyltransferase family 92 320 571 IPR008166 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g00948 Rops-Chr1 22973866 22976027 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g00948 - - gmx:100781994 1000.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops1g00948 1 22973866 22976027 Rops1g00948 1 22973866 22976027 ECH
Rops1g00948 1 22973866 22976027 Rops1g00948 1 22973866 22976027 PCT