Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g00947 ATGTCCTCGAGGCGCCACTCGCTTAGCGGACCGGTTCAACTCAGTGGTCGTGCCGGGTCGACTCAGGAGCTCCGGCAACGAGTCGTCACTTGCCTGAACAAACTCTCTGACCGCGACACACTCGCCGGAGCCTCCGTGGAGCTTGAGTCCATAGCAAGATCCCTAAGCCATGACTCGTTCTCCTCTTTTATCTCATGCATTCACAACACCGATTCGTCTTCCAAATCGCCGGTGAGAAAACAATGCGTTCAACTTTTGAGCATTCTCTCGCGGTTCCATGGCGATGCTCTCTCTCCTTTTCTCTCCAAGATGATCGCCACCGTCCTCCTCAGAATCCGAGATTCTGACTCCGCCGTCCGATCCGCTTGCGTTGACGCCGTCGCCGCCATGTCCTCGCGGATCACTAAACCGCCGTTCTCCGCCGCGTTCATGAAACCGTTCATGGACACACTGGCGCAGGAGCAGGACGCGAACTCGCAGATCGGCGCCGCGCTATGCCTTGCGGCAGCGGTTGAGGCGGCGCCGGACCCGGACGTCGAGTCTCTCCTGCGGAGCGTGATGCCGAGGTTGGGGAAGCTTGTGAAGAACGAATCCTTCAAGGCGAAGGCGGCGCTGCTGGTTCTGATCGGAAGCGTCGTCGGCGTCGGCGGTGCGGCGAGCCGTGGAGCGATGAATTGGTTGGTTCCTTGCCTCGTTGAGTTCCTTAGCAGTGACGATTGGACGGTGAGAAAGGCCTCTGCAGAAGCGCTTGGAAAAGTTGCTTCGATGGAGAACGATTTGGCGTCACAGCATAAGGTTCTGTGCTTGGAATCGTTGCAGAATCGAAGGTTTGATAAGGTTAAAGTAGTTAGGGAGACTATGAATCATGCGTTGGATATGTGGAAGGAGGTAACTGATGTATCTGAGGATGTTGTTCCTTCTCCAGTTAAGTCCGAAAGTGCTTCAGTTGGCACAGATCATGGTAAAGGTCAGTGTGTTGCTAAAAGTTCACCTGATGTTAGCTCGAAATCTTCTCAATCAAAGAAAGCAGTCCCTGCCAACAGGTCCCCTCCATCTACAGTTTCATTTGCATCCTCCATCAGAAGAGAGAGTCCTCTTAAGACTAATGATAAGGATTCTAGAATTGGGTCATTGCATCAGCAGGATCACAAGAAATTTTCAGATGAGAAACATGAAACCCCAGTATCAAAGTCCTCCCACTTGAACATGTCTGGGGAAGATGATATTAAAAGGTGTGATTTTGAAGCTTTTAAGCCAGCCCCATATCAAAATGGGGTAAATTCAAGGGCAGATATAAAGCATGTTCTCTTTAGCAAGATGCCTGATGAGAAAGTGCGGAGATTTGGTGGTTCAAAATCTCGTGTTGTTCCATGTTATGATGATGACAAACCTGACACAGATGTTACAGTCAACAATGTAAATGAAATTTGTGAGAGCCCACAAGATGTTGAGGATTTGTCTTTGATCCGTGAACAACTTATTCAAATTGAAAACCAGCAATCAAATCTGTTAGACCTCCTCCAGAGATTTATTGGAAGCTCCCAAAGTGGGATGAATTCTCTGGAGACACGTGTACATGGTCTAGAGATGGCCCTGGATGAAATATCATATGATTTGGCAGTATCAAGTGGCAGGTTTCCCAATACTGATGCCATAGAAGACACGTGTTGCAAGCTACCTGGTACTGACTTTTTGAGTTCTAAATTCTGGAAGAAGACAGAAGGACGGTATTCCACATCAAGGTTCTCTTTAGGAAGCTCAACATCAACAAATGCTGCGCATAATGCTACTGACAAAGATGGAAACAAAGAAATAACTGCAAATAACAAAAGAATTCAGCATCCTAGGGATGGGGGTGGAGTGTTTATGAACCCACTGACAGAAGTTCGAAGTGACTTGAAAGGGCATTTAGGGCAACATTCATATAAGATGTCTAAAAACATGGTTCAAGGTGCCGAGAGAGCACAAAGTAACCGTGCCAACAGATTTGATGGCATTTCATCATCTAGCGCACTGAGGAACCAGAGTATCAGGTCATCCGTGTAG 2046 0.4814 MSSRRHSLSGPVQLSGRAGSTQELRQRVVTCLNKLSDRDTLAGASVELESIARSLSHDSFSSFISCIHNTDSSSKSPVRKQCVQLLSILSRFHGDALSPFLSKMIATVLLRIRDSDSAVRSACVDAVAAMSSRITKPPFSAAFMKPFMDTLAQEQDANSQIGAALCLAAAVEAAPDPDVESLLRSVMPRLGKLVKNESFKAKAALLVLIGSVVGVGGAASRGAMNWLVPCLVEFLSSDDWTVRKASAEALGKVASMENDLASQHKVLCLESLQNRRFDKVKVVRETMNHALDMWKEVTDVSEDVVPSPVKSESASVGTDHGKGQCVAKSSPDVSSKSSQSKKAVPANRSPPSTVSFASSIRRESPLKTNDKDSRIGSLHQQDHKKFSDEKHETPVSKSSHLNMSGEDDIKRCDFEAFKPAPYQNGVNSRADIKHVLFSKMPDEKVRRFGGSKSRVVPCYDDDKPDTDVTVNNVNEICESPQDVEDLSLIREQLIQIENQQSNLLDLLQRFIGSSQSGMNSLETRVHGLEMALDEISYDLAVSSGRFPNTDAIEDTCCKLPGTDFLSSKFWKKTEGRYSTSRFSLGSSTSTNAAHNATDKDGNKEITANNKRIQHPRDGGGVFMNPLTEVRSDLKGHLGQHSYKMSKNMVQGAERAQSNRANRFDGISSSSALRNQSIRSSV* 682
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g00947 681 Pfam HEAT repeat 227 255 IPR000357 GO:0005515
Rops1g00947 681 SUPERFAMILY ARM repeat 36 294 IPR016024 -
Rops1g00947 681 ProSiteProfiles HEAT repeat profile. 227 265 IPR021133 -
Rops1g00947 681 FunFam ARM repeat superfamily protein 24 214 - -
Rops1g00947 681 Coils Coil 489 509 - -
Rops1g00947 681 PANTHER MICROTUBULE-ASSOCIATED PROTEIN TORTIFOLIA1 22 614 IPR033337 GO:0005874|GO:0008017
Rops1g00947 681 MobiDBLite consensus disorder prediction 302 405 - -
Rops1g00947 681 MobiDBLite consensus disorder prediction 582 596 - -
Rops1g00947 681 MobiDBLite consensus disorder prediction 582 621 - -
Rops1g00947 681 MobiDBLite consensus disorder prediction 328 363 - -
Rops1g00947 681 Gene3D - 14 371 IPR011989 -
Rops1g00947 681 MobiDBLite consensus disorder prediction 597 611 - -
Rops1g00947 681 MobiDBLite consensus disorder prediction 364 396 - -
Rops1g00947 681 MobiDBLite consensus disorder prediction 648 681 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g00947 Rops-Chr1 22918018 22922647 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g00947 - - tpra:123906851 959.518
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops1g00947 1 22918018 22922647 Rops1g00947 1 22918018 22922647 ECH