Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g00941 ATGCTTTCTCATCGTTTAAACGCCGTCGTTTTGTTCCTCATTGTGTGCTGTCTCTTCCCACCGTTTTGCCTCGGGATTAGGTCTTTTCCGACCGCCGGTGGAGCCACCGCCGACGCCCTTTTTCAATACGTGGAGGCGCCGGATTATCGAAACGGAGCGGGTTGCCCTGTACCCGGAAAACATAACCCGGTTTTATCATGTGACCCTTCTTTAGTTCACATCGCCATGACCCTTGATTCGGGTTATCTCCGGGGATCCATCGCCGCCGTGCACTCAGTTCTACGGCACTCTTCTTGTCCGGAAAATGTTTTCTTTCATTTCGTGGCGGCTGAGTTCGACCCGGCAAGTCCACGGGTCCTGACCCGGTTGGTCCGATCCACTTTCCCTTCTTTGAACTTCAAAGTTTACATCTTTAGAGAAGACACTGTGATAAACCTTATCTCTTCTTCAATTCGTCAAGCTCTTGAGAACCCTTTGAACTACGCGAGGAACTACCTTGGAGACATGCTAGATTCATGCGTGGAACGAGTCATTTACCTTGACTCGGATGTTGTTGTCGTTGATGACGTCAGCAAGGTTTGGAACGTGACACTCACTGAGTCACGAGTCATTGGTGCACCCGAGTATTGCCACGCAAATTTCACAAAGTACTTCACTGATGAGTTTTGGTTGGACCCTTTGTTGTCACGCGTGTTTGCTTCTAGAAGGCCTTGTTATTTCAACACTGGGGTGATGGTTATGGATTTGGTTAGGTGGAGGGAAGGGAACTATAGAAAAAGGATTGAGAATTGGATGGAGTTGCAAAAGAAAAAGAGGATCTATGAGTTGGGTTCTTTACCTCCTTTTTTGCTTGTTTTTGCTGGGAATATTGAACCTATTGATCATAGGTGGAACCAACATGGGCTTGGTGGGGATAATGTTAATGGGGTTTGTAGGTCTTTGCATCCTGGTCCTGTTAGCTTGTTACATTGGAGTGGGAAAGGGAAACCTTGGGTTAGGCTTGATGTGAAGCAACCTTGTCCATTGGATCGACTTTGGGAGCCTTATGATCTTTACAAGCCACGCCGGTTTCATAATAGAGCCAGGGATCAGATTCAATCTTGGAGTTTCTCTTCTTCAATATTGGTTGGATATGCTCATGATTTGTTATGA 1152 0.4661 MLSHRLNAVVLFLIVCCLFPPFCLGIRSFPTAGGATADALFQYVEAPDYRNGAGCPVPGKHNPVLSCDPSLVHIAMTLDSGYLRGSIAAVHSVLRHSSCPENVFFHFVAAEFDPASPRVLTRLVRSTFPSLNFKVYIFREDTVINLISSSIRQALENPLNYARNYLGDMLDSCVERVIYLDSDVVVVDDVSKVWNVTLTESRVIGAPEYCHANFTKYFTDEFWLDPLLSRVFASRRPCYFNTGVMVMDLVRWREGNYRKRIENWMELQKKKRIYELGSLPPFLLVFAGNIEPIDHRWNQHGLGGDNVNGVCRSLHPGPVSLLHWSGKGKPWVRLDVKQPCPLDRLWEPYDLYKPRRFHNRARDQIQSWSFSSSILVGYAHDLL* 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g00941 383 Pfam Glycosyl transferase family 8 73 333 IPR002495 GO:0016757
Rops1g00941 383 SUPERFAMILY Nucleotide-diphospho-sugar transferases 72 354 IPR029044 -
Rops1g00941 383 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 73 341 IPR029044 -
Rops1g00941 383 FunFam Hexosyltransferase 73 340 - -
Rops1g00941 383 PANTHER GLYCOSYLTRANSFERASE 8 DOMAIN-CONTAINING PROTEIN 13 355 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g00941 Rops-Chr1 22598470 22600180 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops1g00941 7 364 Glycosyltransferase AT1G70090 74.044 0.0 559
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g00941 - - vra:106762685 671.389
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops1g00941 1 22598470 22600180 Rops1g00941 1 22598470 22600180 ECH