Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g00939 ATGGGTGAATTTGTTGTGGATGCAAATACAACAATATTTGGAGATAAGATGGGTGAAACTGCTGCTGCTTCAAATCCTGCTTTGCAAGTGTCTGTTTCATTTGGTAGATTTGAGAATGATACCTTGTCTTGGGAGAGATGGTCAACTTTCTCTCCAAATAAGTACTTGGAAGAAGTTGAGAAGTGTGCCACTCCTGGATCAGTAGCCCAGAAGAAAGCTTACTTTGAAGCCCATTACAAGAAAATTGCTGCCCGGAAAGCCGAATTGCTGGCTCAAGAGAAGCAAACTGAGAAAGATTCTTTCAGATCAGAAGATCAAAATGGTATAGATCTGAGTGGTAACACTTGTGGAAATGATGCAGAATTTGATATATCCAACACTCAAGGTACCATTGAAGGGGTTAAGGAAGAAATCAGCTCTGTTGGTGAGACCAGTGGGAACCATGTGGATAATTTGAAGGAGGAAATTGCAGTTTCAAGAGATTACCAGAGTTCATCAGTTGAGGTAGAGAACAAGGAACTGGAAAGTAGGTCACATAATTCCCACCAGATAGATGAACCTGAAGAAGATGTGTGCATAAAACATGAAGAAAGTCTTCACATTGAAGCTGAAGATGTTAAGGAAATTTCACATGTTGTGTACAAGGAGAAGGAGACAGAAAAGGCTTCAGAAGTTGAAGCAAAAGATGTGAAATTGGATCATCCAAAGGAATCCAAGGTTATCTCCTTGAAAAGGGAAAGCAATGCAGCCAATACTAAGAAGAAATCAGTGCTACCTAAATCTAAGGCATCCCAAATTTCTACACCAAAAAGTTCAAAGCCTACATCAACTCCAACTAAAACAGTGGCACCTGCCTCTTCAACTAAAAAGGGAAGTTCTTCATCTTTACATAGGAGGCAAATTACTTCCACTGGGGAGAGCAGAAAAGTTGCAAACAAATCTTTGCACATGTCACTTAGCTTGGGTCCAAGTAATCCTGATCCAGCTCCTCATACCAACATGAGGAAATCTTTCATCATGGAGAAAATGGGGGATAAGGACATAGTCAAAAAAGCATTTAAGACATTCCAGAAAAATTTCAACCAGCCAAAAACTTCTGGTGAAGACAGGTCTTTCATAAACAAGCAGGTTCTTTCAAGGGGGACTGTCTCAAAGGTTCAACCATCTACAGCTTTGCAGAAAGAAAATGGACGGCCAACTAAGGTTGAGAATAAGGATAAAAGAAGTGGAAATGCTGTACAAACTACTACTACTACTTTGGGCCTAAAAATTGACATTACAGCAGAGAAAGGGAAAGAGTCTTCAAGAAAAATAGAGGAAAAATCTAATGCAAAAGAGATAGAAAGAATGCGTCATCAATCCAAATTGAAGGAGGAAAAAAAGGCAGAGATGAAAAAGCTAAACCATAATTTCAAGGCCACACCACTACCAGCTTTTTACCGTGGTCAAAAAGTATCAAAAAGTCAACCAGAAAAGGATGATGCTAAGACTAAGGGCTCTCGGTAG 1506 0.3964 MGEFVVDANTTIFGDKMGETAAASNPALQVSVSFGRFENDTLSWERWSTFSPNKYLEEVEKCATPGSVAQKKAYFEAHYKKIAARKAELLAQEKQTEKDSFRSEDQNGIDLSGNTCGNDAEFDISNTQGTIEGVKEEISSVGETSGNHVDNLKEEIAVSRDYQSSSVEVENKELESRSHNSHQIDEPEEDVCIKHEESLHIEAEDVKEISHVVYKEKETEKASEVEAKDVKLDHPKESKVISLKRESNAANTKKKSVLPKSKASQISTPKSSKPTSTPTKTVAPASSTKKGSSSSLHRRQITSTGESRKVANKSLHMSLSLGPSNPDPAPHTNMRKSFIMEKMGDKDIVKKAFKTFQKNFNQPKTSGEDRSFINKQVLSRGTVSKVQPSTALQKENGRPTKVENKDKRSGNAVQTTTTTLGLKIDITAEKGKESSRKIEEKSNAKEIERMRHQSKLKEEKKAEMKKLNHNFKATPLPAFYRGQKVSKSQPEKDDAKTKGSR* 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g00939 501 MobiDBLite consensus disorder prediction 252 331 - -
Rops1g00939 501 MobiDBLite consensus disorder prediction 486 501 - -
Rops1g00939 501 MobiDBLite consensus disorder prediction 215 333 - -
Rops1g00939 501 PANTHER F3I6.9 PROTEIN 1 492 - -
Rops1g00939 501 Coils Coil 84 104 - -
Rops1g00939 501 MobiDBLite consensus disorder prediction 426 468 - -
Rops1g00939 501 Coils Coil 447 470 - -
Rops1g00939 501 MobiDBLite consensus disorder prediction 166 190 - -
Rops1g00939 501 Pfam Targeting protein for Xklp2 (TPX2) domain 422 489 IPR027329 -
Rops1g00939 501 MobiDBLite consensus disorder prediction 106 129 - -
Rops1g00939 501 MobiDBLite consensus disorder prediction 360 501 - -
Rops1g00939 501 MobiDBLite consensus disorder prediction 409 423 - -
Rops1g00939 501 MobiDBLite consensus disorder prediction 360 397 - -
Rops1g00939 501 MobiDBLite consensus disorder prediction 156 190 - -
Rops1g00939 501 MobiDBLite consensus disorder prediction 94 129 - -
Rops1g00939 501 MobiDBLite consensus disorder prediction 215 251 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g00939 Rops-Chr1 22591110 22595860 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g00939 - - gmx:100810690 655.595
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops1g00939 1 22591110 22595860 Rops1g00939 1 22591110 22595860 ECH