Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g00863 ATGGCGACGCTTGCACCTGGGATTTTATTGAAGCTCCTCAATGGTTTGAACACGGGTGTGAAACCCACAAGCGAACACCGAAGTTCGTTGTTGCAGGTCACAGATATTGTCCCTGCTGATCTCGACGAGAAGAACCTTATTCCAAAACAAGGCTTTTACATAAAGGTCTCCGATTCATCACACTCCATCTATGTGAGTCTTCCTTCTGACCAAGATGATTTCGTTCTCAGCAACAAAATGCAGCTGGGTCAGTTCATCTATGTGGAAAGATTAGAGCCTGGTTCCCCTGTTCCCGTTCTCAAAGGTGCTAAACCATTACCTGGAAGGCACCCTCTTGTTGGCACCCCAGAACCTTTGATGGGTCTCAGAGACAACAACAACAATAACAAGAAGCAGCCTAGTTCAGCCCCTAGAAGAGGTTCTTGGGGAACAGGGAAGAAGAAGAATAATAATAATGGTGATGACATTTCTTCTCCCATGGTTTTCAAGCCTGTTAATTTGGACTTTGATCAGTGCACCCCTGTGAAAGAACGTGGCAGTTTTAGAGGAAAAGAGGGTACTCCTGTTTCTGCTATGAGATGTTCAGTTGGTGGAGGGCTTCTAGCAAAGATGACAGATTCAAAGGGAGAAAGTCCTGCATTGCTTAGGAAAAGTTGTGTGGTAGCTTCCTCTAATACAAAGATTTCAAGGAGTAGAAGTGTTTGTGAAAGAGAGCCTAGGATACCAATGAGTCCCTTCAAGTCAGCTGAAAAGAAAAGTTGCACTCCGCCGCCTCGGTTGAGAAATGGAAGAGTGGCAACTTCTATCAATGTTGCTGCTGGAGATGCCCACAATCACGACTCAAATGTCACTTCTCAACCCAAATCTCAGTCTACTACTAATTCGGCTTTTGATAATTCCAACAATCTTAGCCTCCCCATGAATTTACCAGGAAAGCTGAGCTTGCTGGGGAAGGAAGCTGTGCAGCAAAGAGAAGCAGCTCAAAAGATGGCTCTTCAAGCATTAAGAGACGCTTCTGCTACTGAGACAGTAGTTCGGTCCTTGAAGATGTTCTCAAATTTATGCAAATCTGCTCGAGCTGATGCTCCTGCTTCCTGTTTTGAACGGTTTCTGGAATTCCATAACGATATTGTACAAGCAGTTAATGAAGTGATGTCCATTCAAGCAGCAACTTCAGCTTCAGAATTGGCTCAGAAATCAGATAAACAAGCTGAAGAAGAACCCCAGGTTTTGCATGAAGTTATGCAGAATTCCATGGACCAATCCGGGAACTCTGAATCTAACTTGTCAAAAAGAAGGTGCGCTTTGTACAAGTCAATGGCTGCCATTCCTGAAAGACATGAGCACAAAACTAATATGGGGAAGCTCCTAAGATCAAGTATAAATCAAAAGGAGATTTTGGAGAAGAAAAGTTCTACTCCGCTTACAAAAATGCCACTGGAACCTATTGTTGAAAATGATGAGAATAAGAAACCAGCATCAAGTAGCTTAAGCAATACAATCAAACTGGGAAAGCAGATTGAAACAGAAGCTGGGAATTGGTTTATGGAATTCATTGAGAAGGCCTTGGAAGCAGGTTTGAAGAAAACAAAGGAAGCATCAGATGGGGATGTGAGGAAAGTTCCTCAGTCTCTCATACTAAAAGTAATGAACTGGGTTGAGGTAGAACAGTACCACAGTAACAAGCGGGCTACTCACCCTAAAGCAGCAATGATTGCTCGAAAGTTAAGAATAAAGATGAAAAATCCTTGA 1752 0.4304 MATLAPGILLKLLNGLNTGVKPTSEHRSSLLQVTDIVPADLDEKNLIPKQGFYIKVSDSSHSIYVSLPSDQDDFVLSNKMQLGQFIYVERLEPGSPVPVLKGAKPLPGRHPLVGTPEPLMGLRDNNNNNKKQPSSAPRRGSWGTGKKKNNNNGDDISSPMVFKPVNLDFDQCTPVKERGSFRGKEGTPVSAMRCSVGGGLLAKMTDSKGESPALLRKSCVVASSNTKISRSRSVCEREPRIPMSPFKSAEKKSCTPPPRLRNGRVATSINVAAGDAHNHDSNVTSQPKSQSTTNSAFDNSNNLSLPMNLPGKLSLLGKEAVQQREAAQKMALQALRDASATETVVRSLKMFSNLCKSARADAPASCFERFLEFHNDIVQAVNEVMSIQAATSASELAQKSDKQAEEEPQVLHEVMQNSMDQSGNSESNLSKRRCALYKSMAAIPERHEHKTNMGKLLRSSINQKEILEKKSSTPLTKMPLEPIVENDENKKPASSSLSNTIKLGKQIETEAGNWFMEFIEKALEAGLKKTKEASDGDVRKVPQSLILKVMNWVEVEQYHSNKRATHPKAAMIARKLRIKMKNP* 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g00863 583 MobiDBLite consensus disorder prediction 99 160 - -
Rops1g00863 583 MobiDBLite consensus disorder prediction 121 157 - -
Rops1g00863 583 MobiDBLite consensus disorder prediction 274 302 - -
Rops1g00863 583 Pfam Plant protein of unknown function (DUF936) 4 296 IPR010341 -
Rops1g00863 583 Pfam Plant protein of unknown function (DUF936) 223 553 IPR010341 -
Rops1g00863 583 PANTHER EXPRESSED PROTEIN 1 557 IPR010341 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g00863 Rops-Chr1 20957437 20960231 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g00863 - - gmx:100808883 877.856
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops1g00863 1 20957437 20960231 Rops1g00863 1 20957437 20960231 ECH