Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g00861 ATGGCCCAATCTGAAATCACATTCTTCACGAACCAAAAAGAAAAAAAGAAAAGGGGTGAAAATAATATGAACAAACAACTCACCCTTCTCTGTTTCTTTATCCTCTTCTTCACATCTCTCAGTGTTGGTTTCGCCGGCGATGCGGTGGTCGGAGAGAAAAACCCGTTCACCCCAAAGGCCTTTGTGATTCGTTATTGGGACAAAGAGATCCGAAACGGCTTGCCGAAACCGTCGTTTTTGCTTTCAAAGGCCTCACCGCTGAGCGCGGTGGATGCGGCGTCGTTCGCTAAACTCGCCGCCGGTGAAGCACTCTCCACGCGCCTGCCGGAATTCTGCTCCGCCGCGAAACTCCTCTGTTTCCCGGAAGTGGGGCCCAGCCTCGCGAAGCACGATAAAGACGCGAACTTTAAAGTGTACCAAGATAAGAACTTCACCAACTACGGAACGGGTCGACCCGGTGGGGTTGACTCGTTCAAGAACTACTCAGATGATCAGAACATTCCGGTGAACGATTTCCGACGATATAGCCGTGACTCCGCCGGACACAAGGACAGTTTCTCAAGCTATGGCTCAAACGGTAACGTGGTGGACCAAAGCTTCCACACCTACGCTGCCGCAGCCACCGGCGGCGCCGGCGAGTTCAAAAGGTACTCAAACCAAGTCAATGTCCCAGACCTCCGTTTCACCTCTTACTCCGACGACGCCAACGGAAGAACCCAATCGTTCTCTTCTTACTCCGAAAACGGCAATGCCGGAGACCAATCCTTCACCAGTTACGGCAAAAACGGCAATGGCCCCACCAACGAGTTCACATCTTACGGAACAGGCTCCAACGTTGTCGGTTCGGGATTCTCCAATTACGCCGAAACCTCAAACGCCGCTAATGACACTTTCAAAAATTACGGCGTCGACATGAACAACCCCACCAACACTTTCTCCAACTACGCTAACGGCGGTAACGGCGCAACCGAGAACTTCGCCAATTACCGCGACAAGGCCAACGTTGGTGCCGATTCCTTCACCTCGTACGCTAAATCCTCAAACGCCGCCAAAGTGGGTTTCAACAACTACGGAAAATCCTTCAATGAAGGAACCGACGCGTTCACCGGTTACGCCAAAAGCTCAAATGGTGAAACAAAGGTTGATTTCAAAGGCTATGGAGTGAACAACACTTTCAAGGATTATTCAAAAGAGGGTGTCTCGTTTGCTAAGTACACTAACGTGAGCACCATGTTAAGTGCTTCTATGGCGAAAACAGGGATGAGTGGCAATTTGGTAAAAAAGTGGGTTGAACCGGGTAAATTTTTCAGGGAGGAGATGATGAAGGAAGGGACGGTAATGCCTATGCCTGACATTAGAGATAAAATGCCTGAAAGGTCGTTTTTGCCCCGGACCATTTTGTCGAAATTACCATTTTCGGCCTCGAAGATCTCAGAGTTGAAGCAACTGTTCAAAGCTTCGGATAATGGTTCAATGGAGAAGATGATGAGGGATTCATTGGAAGACTGTGAGAGGGTTCCAAGCCGTGGCGAAACCAAGCGCTGTGTGGGTTCCATTGAGGACATGATCGACTTTGCAACATCTGTTTTGGGTCGAAACGTCGTCGTTCGGACCACCCACAACACAAACGGGTCAAAGAAGAATGTCATGGTGGGTCGGGTTCAAGGGATTAACGGTGGGAAAGTGACCCGATCCGTTTCTTGTCACCAGAGCTTGTTTCCTTATCTACTTTACTACTGCCACTCTGTCCCAAAGGTTCGGGTCTACCAAGCGGATCTACTTGACCCGAACACTAAAACCAATATCAACCATGGTGTTGCCATCTGTCACTTGGATACTTCAGATTGGAGCCCCACTCATGGGGCTTTCCTTTCTCTCGGGTCGGGTCCGGGTAGGATTGAGGTTTGCCACTGGATCTTCCAGAATGATATGACCTGGACCATTGCTGATTGA 1953 0.4977 MAQSEITFFTNQKEKKKRGENNMNKQLTLLCFFILFFTSLSVGFAGDAVVGEKNPFTPKAFVIRYWDKEIRNGLPKPSFLLSKASPLSAVDAASFAKLAAGEALSTRLPEFCSAAKLLCFPEVGPSLAKHDKDANFKVYQDKNFTNYGTGRPGGVDSFKNYSDDQNIPVNDFRRYSRDSAGHKDSFSSYGSNGNVVDQSFHTYAAAATGGAGEFKRYSNQVNVPDLRFTSYSDDANGRTQSFSSYSENGNAGDQSFTSYGKNGNGPTNEFTSYGTGSNVVGSGFSNYAETSNAANDTFKNYGVDMNNPTNTFSNYANGGNGATENFANYRDKANVGADSFTSYAKSSNAAKVGFNNYGKSFNEGTDAFTGYAKSSNGETKVDFKGYGVNNTFKDYSKEGVSFAKYTNVSTMLSASMAKTGMSGNLVKKWVEPGKFFREEMMKEGTVMPMPDIRDKMPERSFLPRTILSKLPFSASKISELKQLFKASDNGSMEKMMRDSLEDCERVPSRGETKRCVGSIEDMIDFATSVLGRNVVVRTTHNTNGSKKNVMVGRVQGINGGKVTRSVSCHQSLFPYLLYYCHSVPKVRVYQADLLDPNTKTNINHGVAICHLDTSDWSPTHGAFLSLGSGPGRIEVCHWIFQNDMTWTIAD* 651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g00861 650 PANTHER POLYGALACTURONASE 1 BETA-LIKE PROTEIN 2 36 650 - -
Rops1g00861 650 MobiDBLite consensus disorder prediction 232 269 - -
Rops1g00861 650 ProSiteProfiles BURP domain profile. 435 649 IPR004873 -
Rops1g00861 650 SMART BURP_2 433 649 IPR004873 -
Rops1g00861 650 Pfam BURP domain 435 647 IPR004873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g00861 Rops-Chr1 20928044 20930995 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g00861 - - gmx:100776642 1057.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops1g00861 1 20928044 20930995 Rops1g00861 1 20928044 20930995 ECH
Rops1g00861 1 20928044 20930995 Rops2g02714 2 45730819 45733027 PCT