Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g00859 ATGGCCGGTGCATTGAAAAGGTGCATGATGCTGTGTTGTACGAGCAAGATTGTATCGAAGGAAGACATGGCTGGAGAATCATATGAAGAAGCTATCGCTTCGTTGACCACGCTTCTCAGGGAGAAAGCTGACCTCGGAGACATCGCCGCCACAAAGATCAAGGAGTTAACGGCGGAGTTAGAGGCCGCCGGTTCAAAACCGTTTAATCCGGACGAGAGGATCCGAACCGGGTTTGTTCACTTCAAGACAGAGAAATTTGAGAAGAATCCAGATCTGTATGGTGAACTTGCCAAAGGTCAGAGCCCAAAGTTTATGGTATTTGCATGCTCAGACTCGAGAGTTTGCCCATCCCATATTCTTGATTTTCAACCGGGTGAAGCCTTTGTGGTTAGAAACATCGCCAACATGGTTCCACCATATGATAAGACTAAGTATTCAGGAGCAGGGGCAGCCATTGAATATGCAGTCCTTCATTTAAAGGTGGAGAATATTGTAGTTATTGGACACAGTTGCTGTGGAGGTATAAAGGGACTCATGTCTATCCCAGATGATGGGACCACTGCAAGTGAATTCATAGAGCAATGGGTCCAAATATGTAATCCAGCAAAGTCCAAGGTTAAAACAGAAACAAGCGATTTAAGTTTCTCGGAGCAGTGTACTAACTGTGAGAAGGAAGCTGTGAATGTATCACTTGGGAACCTATTGACTTATCCATTTGTGAGAGATGGGCTTGTGAAGAAAACTCTCGCTTTGAAAGGAGCACATTATGATTTTGTTAATGGAACTTTTGAGCTGTGGGATCTGAACTCCAAACTTTTGCCCTCTTTATCCATTTAA 837 0.4409 MAGALKRCMMLCCTSKIVSKEDMAGESYEEAIASLTTLLREKADLGDIAATKIKELTAELEAAGSKPFNPDERIRTGFVHFKTEKFEKNPDLYGELAKGQSPKFMVFACSDSRVCPSHILDFQPGEAFVVRNIANMVPPYDKTKYSGAGAAIEYAVLHLKVENIVVIGHSCCGGIKGLMSIPDDGTTASEFIEQWVQICNPAKSKVKTETSDLSFSEQCTNCEKEAVNVSLGNLLTYPFVRDGLVKKTLALKGAHYDFVNGTFELWDLNSKLLPSLSI* 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g00859 278 SMART Pro_CA_2 97 267 IPR001765 GO:0004089|GO:0008270
Rops1g00859 278 ProSitePatterns Prokaryotic-type carbonic anhydrases signature 2. 153 173 IPR015892 GO:0004089|GO:0008270|GO:0015976
Rops1g00859 278 PANTHER CARBONIC ANHYDRASE 59 269 IPR001765 GO:0004089|GO:0008270
Rops1g00859 278 Pfam Carbonic anhydrase 105 262 IPR001765 GO:0004089|GO:0008270
Rops1g00859 278 Gene3D Carbonic anhydrase 64 278 IPR036874 GO:0004089|GO:0008270
Rops1g00859 278 FunFam Carbonic anhydrase 59 278 - -
Rops1g00859 278 SUPERFAMILY beta-carbonic anhydrase, cab 72 274 IPR036874 GO:0004089|GO:0008270
Rops1g00859 278 CDD beta_CA_cladeB 77 266 IPR045066 GO:0004089|GO:0008270
Rops1g00859 278 ProSitePatterns Prokaryotic-type carbonic anhydrases signature 1. 109 116 IPR015892 GO:0004089|GO:0008270|GO:0015976
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g00859 Rops-Chr1 20878781 20890846 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g00859 K01673 - gmx:100803945 520.776
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops1g00859 1 20878781 20890846 Rops1g00859 1 20878781 20890846 ECH
Rops1g00859 1 20878781 20890846 Rops2g02707 2 45526319 45532843 PCT