Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g00838 ATGGAAGAGTTGGAGCAATTGAAGCTACAAGTTTCTCGCTATTGGCGTTTGGCTAACGATTATCTTCGTGAGGTTCCTCCCAATCAGCTCTACGTCGCTGCTGCTCTCGCGATTTTCACAACCTTGCTTCTTCTGTCACTAAGGTTGTTGAAGCGCGCGAAGTCAAACACCATTGTGTTGACTGGGCTTAGTGGGAGTGGGAAAACTGTTCTCTTCTATCAGCTTAGGGATGGCTCTACTCATCAGGGCACTGTTACATCAATGGAACCTAATGAAGGTACTTTTATTCTTCATGGTGAAACAACAAAGAAGGGCAAGATAAAACCTGTTCATATTGTTGATGTTCCTGGGCATTCTCGTCTTCGACCCAAACTGGATGAGTATTTGCCTCAAGCAGCTGGCATAGTCTTTGTGGTTGATGCTTTGGACTTCTTACCAAATTGCCGTGCTGCTTCAGAGTACCTGTATGATCTATTGACCAAGGGAAGTGTTGTGAGGAAAAAGATTCCACTGCTTATTCTCTGCAACAAAACAGACAAAGTCACTGCTCACACCAAAGAATTTATCCGCAGACAGATGGAGAAGGAAATCGACAAATTACGGGCATCAAGAAGTGTGGTATCAGCAGCTGATGTTACAAATGAGTTCACTCTGGGGGTACCTGGTGAGCCATTTTCTTTTACCCAGTGCTCTAACAAAGTTACAACTGCAGATGCTTCTGGTTTAACTGGGGAGATATCTCAGCTGGAAGAGTTTATCAGAGAATATGTAAAGCCATAA 780 0.4385 MEELEQLKLQVSRYWRLANDYLREVPPNQLYVAAALAIFTTLLLLSLRLLKRAKSNTIVLTGLSGSGKTVLFYQLRDGSTHQGTVTSMEPNEGTFILHGETTKKGKIKPVHIVDVPGHSRLRPKLDEYLPQAAGIVFVVDALDFLPNCRAASEYLYDLLTKGSVVRKKIPLLILCNKTDKVTAHTKEFIRRQMEKEIDKLRASRSVVSAADVTNEFTLGVPGEPFSFTQCSNKVTTADASGLTGEISQLEEFIREYVKP* 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g00838 259 PANTHER TRANSFERRIN 30 256 - -
Rops1g00838 259 CDD SR_beta 56 256 IPR019009 -
Rops1g00838 259 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 58 205 IPR027417 -
Rops1g00838 259 ProSiteProfiles small GTPase Arf family profile. 49 253 - -
Rops1g00838 259 Gene3D - 50 257 IPR027417 -
Rops1g00838 259 Pfam Signal recognition particle receptor beta subunit 54 234 IPR019009 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops1g00838 1 259 Miscellaneous Gene Families AT5G05670 72.308 1.83e-141 395
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g00838 K12272 - gmx:100800572 440.269
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops1g00838 1 20613822 20616854 Rops1g00838 1 20613822 20616854 ECH