Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g00824 ATGGATTTGTTAGTGGGAGAAGTGTTTCCCTTGACAAAATCAAAATCTAGGAATACACAGTTTTGTTTTGTGGATGCAAGAAGACAAGGCCAATGTCAACAAATTCACATGGATTCAACAATAGAAACAAGGAAGAGAAATTTCTCAAGCATGGATTTTAGCTTGTGTTTGAGCTCCCCAATCATTTCCACACTTGTACATTTTCTTCTTGTTGCTTCTTTGCTTTGTCCTGTTTGTTCCTCAGAAATTAGCAACACCCCAGTTGCCAATGAGACTTTTAGGCCACAAGAAGAGATGCACAAGATGAAAATCATAAGAAATCGTCTTCAACAGATCAATAAGCCAGCTATTAAGACAATTCAGAGTCCTGATGGTGATATCATAGACTGTGTTATTTCTCATAGACAACCAGCTTTTGATCATCCTCTATTGAAAGGGCGCAGACCACTGGATCCCCCAGAAAGGCCTAAAGGGCATCACCAAATGGATGTGTTGAGTGAGAATTTTCAGTTATGGACCTTATCAGGGGAATCATGTCCAGAAGGTACAATTCCAATAAGAAGAACAACAGAACAAGATATGTTAAGGGCTAGTTCTGTAAGCAGATTTGGAAGAAAAATAAGAAGACGTGTTAGAAGGGACACAAACAGCAATGGACATGAGCATGCAGTTGGGTATGTGAGTGGAGAACAGTATTATGGAGCAAAGGCTAGCATAAACGTGTGGGCACCACGGGTGGCAAATCAATATGAATTCAGCTTGTCCCAAATGTGGGTCATCTCTGGTTCATTTGGAGATGATCTTAACACCATTGAAGCTGGTTGGCAGGTCAGCCCGGAACTCTATGGGGACAGTTACCCTAGATTCTTTACTTACTGGACGAGTGATGCATATCAAGCAACTGGGTGCTACAATTTACTGTGCTCAGGCTTTGTTCAAACTAACAGTAGAATTGCAATTGGGGCTGCAATCTCTCCAACTTCTTCATATGGCGGTGGACAATTTGATGTTAGTTTGCTCATCTGGAAGGATCCTAAGCATGGAAACTGGTGGCTTGAATTTGGATCCGGAGTCCTAGTTGGGTACTGGCCTTCATTTTTATTCACACACTTAAGGGATCATGCAAGCATGGTACAATTTGGTGGAGAAATTGTGAATTCAAGGCAATCAGGGTCTCACACTTCAACCCAAATGGGCAGTGGGCATTTTGCAGGAGAAGGTTTTGGAAAAGCTTCTTACTTTAGGAATTTGCAAGTTGTGGATTGGGATAACAACTTGGTACCCTTGTCAAATCTCAGGGTTCTGGCAGATCACCCCAATTGCTATGACATACAAGGAGGGATTAATAATGTTTGGGGGAATTACTTTTACTATGGTGGACCTGGGAGAAATGTGAGATGTCCCTAA 1407 0.4179 MDLLVGEVFPLTKSKSRNTQFCFVDARRQGQCQQIHMDSTIETRKRNFSSMDFSLCLSSPIISTLVHFLLVASLLCPVCSSEISNTPVANETFRPQEEMHKMKIIRNRLQQINKPAIKTIQSPDGDIIDCVISHRQPAFDHPLLKGRRPLDPPERPKGHHQMDVLSENFQLWTLSGESCPEGTIPIRRTTEQDMLRASSVSRFGRKIRRRVRRDTNSNGHEHAVGYVSGEQYYGAKASINVWAPRVANQYEFSLSQMWVISGSFGDDLNTIEAGWQVSPELYGDSYPRFFTYWTSDAYQATGCYNLLCSGFVQTNSRIAIGAAISPTSSYGGGQFDVSLLIWKDPKHGNWWLEFGSGVLVGYWPSFLFTHLRDHASMVQFGGEIVNSRQSGSHTSTQMGSGHFAGEGFGKASYFRNLQVVDWDNNLVPLSNLRVLADHPNCYDIQGGINNVWGNYFYYGGPGRNVRCP* 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g00824 468 Gene3D - 242 390 - -
Rops1g00824 468 FunFam Putative carboxyl-terminal proteinase 241 360 - -
Rops1g00824 468 Pfam Neprosin activation peptide 119 226 IPR025521 -
Rops1g00824 468 PANTHER PROTEIN, PUTATIVE (DUF239)-RELATED-RELATED 104 464 - -
Rops1g00824 468 Pfam Neprosin 250 461 IPR004314 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g00824 Rops-Chr1 20146684 20150762 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g00824 - - gmx:100776639 861.677
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops1g00824 1 20146684 20150762 Rops1g00824 1 20146684 20150762 ECH
Rops1g00824 1 20146684 20150762 Rops2g02978 2 52707919 52712286 PCT