Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g00815 ATGGCGTCGTCGGCGACGGAGGAGAAGCGAGTGGAGGAAGAGTTATCATACCCGATTCTCGTGGCGGAGCGAGTTCGCTCGGCGGTGGAGGAAGCCGGGTCATTCAAACTCGAGTGCTCGGAAATTTGGAAGCAAGTGGATCGCCTCCTCCAAATGCTCCGAACGGTGGTTCGACTCGCCGCATCGCCGCCTCTCTACGAACGCCCCATCCGGCGAGTCGCCGCCGAGACGGCGAAGAATCTAGAACGTGCTCTAACACTTGTCAGAAAGTGCAAACGCCGGAGCATCCTCCACCGCATGGTTAACATCGTCAGCGCCGCCGATTTCCGGAAGGTTCTCGTTTACCTCGACGCCTCCGTCGCCGACATGCGGTGGCTGTTGAGCATCCTCGACGCCGACGGCAGCGGCGGCGGGATTGTCGTCTCTCTCCCTCCAATTGCGAGCAATGACCCGATTCTATCATGGGTATGGTCTTTTATAGCTTCTATTCAAATGGGTCAATTGAATGATAGAATTGAAGCTGCAAATGAACTTGCTTCTTTAGCACAAGATAATGATAGGAATAAGAAGATTATAGTTGAGGAAGGTGGGGTGCCTCCTTTGTTGAAGCTTTTCAAGGAAGGCACTTCCCCTGCTGCTCAGATTGCAGCTGCTAGTGCTTTGTGTCATCTTTGTAATGATTTGGAGAGAGTTAGAGTGATTGTGAATGAGGTTGGAGTACCTGCTATTGTTCAGGTTCTTAGTGATTCCCCAATTAGGGTTCAGACCTTAGCTGCCAATTTGGTGGCAAGGATGGCTAAGCATGATCCTGTTGCTCAGGAGGATTTCGCGAGGGAGAACGCGATTAGGCCACTTGTCACGCTGTTATCGTTTGATACTACTGTGGATGAGCAATTGGGAAGGCAAAGTATTCATTCAATTGTTCAGATTAATAAGGAATTGGGGAAGAAGTCATCGGATAGGTCTGGTAACAGGCAATTGGCGAATTCGTACTCGAGTTCGTATTTCAATTCGGAAGGGAGTAGCCGGGGATGGAATCATAGGAAGGAGAGGGAGAATGAGGATCCTGAAGTGAAGCTTCAGTTGAAAATTAGCTGTGCTGAGGCTTTGTGGATGCTTGCGAGAGGGAGTGTGTCCAACAGTAGGAAGATAACTGAGACCAAAGGTATGCTTTGTTTGGCTAAGATTATAGAGAAGGAACAAGGAGAGCTGCAGTACAATTGTTTGATGACGATGATGGAGATAACAGCTGCAGCTGAATCCAACGGTGATCTTCGGCGTGCTGCGTTTAAGACTAACTCTCCTGCTGCTAAAGCTGTTGTGGAACAGCTCTTGAGGATAATTAAAGAGGTAGACAATCCATCACTGCAAATTCCAGCGATAAAGTCCATTGGCTCATTAGCTAGGACATTTTCTGCTAGAGAGACTCGAGTAATTGAGCCTCTAGTAATGCAGCTGAGTAATAGAGTCATAGATGTAGCAGGTGAAGCAGTCATTGCTCTTACCAAGTTCACTTCTCCAGATAATTTCCTATATGCAGAGCATTCTAATACAATAATTGAATTCAATGGAATCCCGGCACTGATGAGACTGCTAAGGAGTAATGACGTGACCCAGTTGCATCATGGGCTAACTCTCCTTTGCTACCTTGCACTGCATGCTCGCAACAGTGAGTCCTTGGACCAAGCAAGGGTGTTGACAGCTCTAGAGGGTGCAGATAGAACAGTTCTACCTCAGCATATAAGAGAATTGGTTTCCAGGGCAATAGTCCACCTCAATGTGTATCATGCAGGAAGGAATTCTCAAAGGATGTTGTATTTGCCTTGA 1827 0.4789 MASSATEEKRVEEELSYPILVAERVRSAVEEAGSFKLECSEIWKQVDRLLQMLRTVVRLAASPPLYERPIRRVAAETAKNLERALTLVRKCKRRSILHRMVNIVSAADFRKVLVYLDASVADMRWLLSILDADGSGGGIVVSLPPIASNDPILSWVWSFIASIQMGQLNDRIEAANELASLAQDNDRNKKIIVEEGGVPPLLKLFKEGTSPAAQIAAASALCHLCNDLERVRVIVNEVGVPAIVQVLSDSPIRVQTLAANLVARMAKHDPVAQEDFARENAIRPLVTLLSFDTTVDEQLGRQSIHSIVQINKELGKKSSDRSGNRQLANSYSSSYFNSEGSSRGWNHRKERENEDPEVKLQLKISCAEALWMLARGSVSNSRKITETKGMLCLAKIIEKEQGELQYNCLMTMMEITAAAESNGDLRRAAFKTNSPAAKAVVEQLLRIIKEVDNPSLQIPAIKSIGSLARTFSARETRVIEPLVMQLSNRVIDVAGEAVIALTKFTSPDNFLYAEHSNTIIEFNGIPALMRLLRSNDVTQLHHGLTLLCYLALHARNSESLDQARVLTALEGADRTVLPQHIRELVSRAIVHLNVYHAGRNSQRMLYLP* 609
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g00815 608 Pfam Armadillo/beta-catenin-like repeat 185 225 IPR000225 GO:0005515
Rops1g00815 608 MobiDBLite consensus disorder prediction 315 356 - -
Rops1g00815 608 Gene3D - 350 593 IPR011989 -
Rops1g00815 608 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 196 239 IPR000225 GO:0005515
Rops1g00815 608 Gene3D - 162 329 IPR011989 -
Rops1g00815 608 MobiDBLite consensus disorder prediction 321 342 - -
Rops1g00815 608 SUPERFAMILY ARM repeat 167 569 IPR016024 -
Rops1g00815 608 PANTHER ARMADILLO REPEAT ONLY 4 10 597 - -
Rops1g00815 608 Coils Coil 165 185 - -
Rops1g00815 608 Gene3D - 13 129 IPR036537 GO:0007166
Rops1g00815 608 SMART arm_5 512 552 IPR000225 GO:0005515
Rops1g00815 608 SMART arm_5 184 226 IPR000225 GO:0005515
Rops1g00815 608 SMART arm_5 227 267 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g00815 Rops-Chr1 20003007 20005224 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g00815 - - gmx:100779659 941.799
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops1g00815 1 20003007 20005224 Rops1g00815 1 20003007 20005224 ECH