Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g00765 ATGTGGTGTTGTTTTCTCACTCTTAGAATCTTGGGTTGGAGGAATATAGAATATATAGAATTGGACATGAGAAGGTCCTGGTTCAATAAATTGTCCATAATTGTTGAACCTAGACCCCCATTGAGCTGGTTAATTTTGTGCTTGATTAGTTTGCTGGCACTGATTGTTGTGTTAGGTTCATCTTCTTGGAATGTTATTGATCCACAACATCACATTCCTGTGTCTCTCATTTACACAAACTATAGAAAGGTTAAGGAGCAAGCTGCAGTTGATTATTTGGACTTGAGGTCTGTGTTAAAGGGTGTGTCTGGAAAAAGGGAACTTGGCCTTTGTGGCAAGGAAAGAGAGAATTTTGTGCCTTGCTATAATGTTTCTGCTAATTTGTTAGCAGGGTTTAAAGAAGGGCAGGAATTTGATCGGCATTGTGAACTTTCAGTTGAAGCAGAGAGGTGTTTGGTTCGGCCTCCTAAGGAATATAAAATTCCCTTGAGATGGCCAATTGGCAGGGATGTTATATGGAGTGGAAATATGAGGATAACCAAAGACCAATTTTTGTCATCTGGGAGTATGACCAAAAGGCTAATGCTACTAGAAGAGAATCAAATTGCTTTTCACTCGGAGGATGGACTGATATATGATGATGTGAAAGATTACTCTCGCCAACTAGCAGAGATGATAGGGTTGGGAAGTGACACTGATTTTCCTGAAGCCGGTGTTCGCACCATACTAGACATTAATTGTGGATTTGATAGCTTTGCAGCTCATTTGGCATCCCTGAAAACAATGGCAGTTTGCATTGCGGCATATGAGGCAACTGGCAGCCAGGTTCAGTTGGCCCTTGAGAGAGGCCTTCCTGCAATGATTGGCAACTTTATTACAAGGCAGCTTCCATATCCTTCATTATCATATGACATGGTTCACTGTGCTCAGTGTGGCATCAATTGGGATGAAAAAGATGGAATGTTCCTTACAGAAGTTGACCGTGTTCTTAAACCTGGAGGATACTTTGTTTTAACCTCATCCACAAGCATGCCCCAGGGAAGTTCTTCGCGGGTGAAAAAGAGAAACTTGTTGATGCCAATGGAAGAGCTGACCCAGCAACTCTGTTGGACTCTTCTAGCTCAGCAAGATGACACATTCATCTGGCAGAAGACTGGTGATGTTGATTGCTATGCATCTCGCAAGAAGTATGCTATACCACTGTGCAAAGAAAGTGAGGATGCTGAGTCATATTATAAGCCTCTTGTACCATGTATAAGTGGGACCTCTAGCAAGCGCTGGATCGCAATACAGAACAGATCCTCTGGAGCTGAATTGAGTTCAGCCGAGCTTGAAACTTATGGAAAGAGTTGA 1353 0.4235 MWCCFLTLRILGWRNIEYIELDMRRSWFNKLSIIVEPRPPLSWLILCLISLLALIVVLGSSSWNVIDPQHHIPVSLIYTNYRKVKEQAAVDYLDLRSVLKGVSGKRELGLCGKERENFVPCYNVSANLLAGFKEGQEFDRHCELSVEAERCLVRPPKEYKIPLRWPIGRDVIWSGNMRITKDQFLSSGSMTKRLMLLEENQIAFHSEDGLIYDDVKDYSRQLAEMIGLGSDTDFPEAGVRTILDINCGFDSFAAHLASLKTMAVCIAAYEATGSQVQLALERGLPAMIGNFITRQLPYPSLSYDMVHCAQCGINWDEKDGMFLTEVDRVLKPGGYFVLTSSTSMPQGSSSRVKKRNLLMPMEELTQQLCWTLLAQQDDTFIWQKTGDVDCYASRKKYAIPLCKESEDAESYYKPLVPCISGTSSKRWIAIQNRSSGAELSSAELETYGKS* 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g00765 450 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 151 344 IPR029063 -
Rops1g00765 450 PANTHER SAM-DEPENDENT METHYLTRANSFERASE 103 425 IPR004159 GO:0008168
Rops1g00765 450 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 117 425 IPR004159 GO:0008168
Rops1g00765 450 FunFam probable pectin methyltransferase QUA2 200 385 - -
Rops1g00765 450 Gene3D Vaccinia Virus protein VP39 212 374 IPR029063 -
Rops1g00765 450 CDD AdoMet_MTases 241 339 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g00765 Rops-Chr1 19001473 19004218 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g00765 K23870 - gmx:100799663 696.041
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops1g00765 1 19001473 19004218 Rops1g00765 1 19001473 19004218 ECH