Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g00335 ATGGGTTCCGAAGTTGAACAACCCATCCCGAACCCAACAACACAAATCACAAACACAAAAACTCACACACCTGAAAAAACTACCGAAACACACGACCGAATTCAAAACATTACTTTGACCGAAAATCACGCCAACGGTAACATAGCCGTTACGACCACTCTCTCAATCGTGCAACCTCATTCACTTCTCCCAAAGCCAGTTCCCCCTTCGAGCCACCACCGAAACGACGTCGTTCCGTCTTCATTCGGAACTTTCCTCCGTCAGCGCAGCAACGACCTGTCGTCTGCGATCGCGAGAGGGATCTCGTCTTTAAAACCCTCAAACGACGAGCCATTGAAGAATAAAAACAACGAAGACGTGACGGAGTTCAACCTAAAAGGCATGAAGGTAGTGGTGATGGTCAAAAACGACTCGTCGTTTACCAAGGGACGAATCAGCTTCTTCTCAAGGTCAAATTGCAGAGACTGCACTGCGGTTAGGAGATTCTTTAAAGAGAGAGGTTTGAAATTCGTGGAGATTAACGTTGACGTGTACGTTGAACGAGAGAAGGAGCTTCTAGAAAGAACGGGAAGTTTCACGGTGCCGAAGATTTTCTTCAACGAGAAACTGATTGGAGGGTTGGTGGAGCTCAACGTGATGAGGAAGAACGGCGGTGTCGAATTGGAGAAGATACTGATAGAGACGGCCAACGGAAAGTTTTCCGGCAATGCTCCGGCTGCTCCGGCATATGGATTTGATGACGTGTCGGAGGAGAAGGTGGAGGAAGATATTGTGAAGGTGGTGAGGTTGTTGAGACAGAGGTTGCCGATTCAGGATCGTTTGATGAAGATGAAGATTGTGAGGAACTGCTTCAATGGAAGTGAGTTGGTGGAGCTTCTCGTTCGCCACCATGGTTGTGAATCTTTCAAGGCTATTGAGATCGGGAAACAGTTATGCAAGAAGCACTTCATCCATCATGTTTTTGGGGAAAATGATTTTGAGGAGGGAAACCACTTCTATCGATTCCTTGAACATGAACCCTTTATCCTCAAATGCTTTAATTTCCGTGGTGCCACAAATGATAGTGAACCGAAGGGTGCCGCTGCAGTTTTTGATAGGCTAACCAAGATTATGGATGCCATTCTTGAGTCTTATGCTTCTGATGACAGGCAACATGTTGATTATGTGGCCATTAGCAAAAGTGAGGAATTTCGTAGGTATGTAAACATGACCCAGGATCTGCAGCGGGTGGATCTCTTGGAACTATCAGAAAATGAGAAGCTTGCCTACTTCTTGAATTTGTACAATGCAATGGTCATTCATGCTGTTATTAGAGTGGGATGTCAAGAAGGTGTAAGTAATAGGAGATCCTTCTCTGATTTCCATTATTTGATTGGAGGACATCCTTATTCTCTTAGTACTATTAAAAATGGTATCCTCAGAAGCAATCGAAGGTCACCATATTCCTTAGTCAAACCCTTTGGCACGGGAGACAGGAGGTTAGAGCTTGCTCTTGTCAAAATGAACCCTTTAATTCACTTTGGACTTTGTAATGGCACAAAGTCGAGCCCAAAGGTGAGGTTTTTCTCACCCTATAGAGTTGCAGAAGAATTGAGATGTGCTGCTAGAGAGTTCTTTGAGAATGGAGTTGAAGTGGACCTGGAGAAGAGGATCATTCATCTCACTCCAATTTTCAAGTGGTATACTGCGGATTTTGGACAAGAGGGAAACATGGTGAAGTGGATTATAAATTACTTGGATGCAAATAAAGCAGGTCTTTTGACACATCTCTTAGCTGATGGTGGTCCTGTTAATATATCATACAAGAATTATGATTGGTCAATAAATTCTTGA 1833 0.4397 MGSEVEQPIPNPTTQITNTKTHTPEKTTETHDRIQNITLTENHANGNIAVTTTLSIVQPHSLLPKPVPPSSHHRNDVVPSSFGTFLRQRSNDLSSAIARGISSLKPSNDEPLKNKNNEDVTEFNLKGMKVVVMVKNDSSFTKGRISFFSRSNCRDCTAVRRFFKERGLKFVEINVDVYVEREKELLERTGSFTVPKIFFNEKLIGGLVELNVMRKNGGVELEKILIETANGKFSGNAPAAPAYGFDDVSEEKVEEDIVKVVRLLRQRLPIQDRLMKMKIVRNCFNGSELVELLVRHHGCESFKAIEIGKQLCKKHFIHHVFGENDFEEGNHFYRFLEHEPFILKCFNFRGATNDSEPKGAAAVFDRLTKIMDAILESYASDDRQHVDYVAISKSEEFRRYVNMTQDLQRVDLLELSENEKLAYFLNLYNAMVIHAVIRVGCQEGVSNRRSFSDFHYLIGGHPYSLSTIKNGILRSNRRSPYSLVKPFGTGDRRLELALVKMNPLIHFGLCNGTKSSPKVRFFSPYRVAEELRCAAREFFENGVEVDLEKRIIHLTPIFKWYTADFGQEGNMVKWIINYLDANKAGLLTHLLADGGPVNISYKNYDWSINS* 611
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g00335 610 CDD DEP 256 334 - -
Rops1g00335 610 ProSiteProfiles DEP domain profile. 264 337 IPR000591 GO:0035556
Rops1g00335 610 SMART DEP_3 264 337 IPR000591 GO:0035556
Rops1g00335 610 Pfam Protein of unknown function, DUF547 414 538 IPR006869 -
Rops1g00335 610 Pfam Glutaredoxin 147 204 IPR002109 -
Rops1g00335 610 SUPERFAMILY Thioredoxin-like 139 217 IPR036249 -
Rops1g00335 610 ProSiteProfiles Glutaredoxin domain profile. 133 232 - -
Rops1g00335 610 Gene3D Glutaredoxin 140 228 - -
Rops1g00335 610 Gene3D - 253 387 IPR036388 -
Rops1g00335 610 SUPERFAMILY "Winged helix" DNA-binding domain 257 350 IPR036390 -
Rops1g00335 610 Pfam Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP) 268 335 IPR000591 GO:0035556
Rops1g00335 610 MobiDBLite consensus disorder prediction 1 23 - -
Rops1g00335 610 MobiDBLite consensus disorder prediction 1 30 - -
Rops1g00335 610 PANTHER ELECTRON CARRIER/ PROTEIN DISULFIDE OXIDOREDUCTASE 24 609 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g00335 Rops-Chr1 9149120 9154469 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g00335 - - gmx:100784667 874.389
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops1g00335 1 9149120 9154469 Rops1g00335 1 9149120 9154469 ECH