Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g00255 ATGGCTTCTATTATAAGGAAATTAAGGACTTCTGTGCCTCCTGTTCCTGTGGAAAGTGAAGATAGCATTAGCAGTTATGAATACTCTTTTGCTGTTGTGTACAATGGCCCTCCTCTTAGTTGCTCCATCCCTGAAATCCCTGCTTTCAAAATTGACCAAATACCAGTTGCAACCATTGCTCCTTCTTTATCATATGATTTCTCTGTGCCAGTTGTTCAACCTCTTGGTAAAACTCATCATGAAAAGAAGCAAAAAATTTCCAAACCAGATTCTACTGTGTCTCCAAATTTGGATTCTCTTGCAGTTGTAACATCAAACAGTGATGTTGATGTGCATGAGAGTACAACAAGTACTTTGGCATCACGTGAGGTTGGTGATGTTCCCACAAACTCTGATACCATAGAATCAGGTTCAAGCTCTAATTCTATTTCTTCTGAAATTTGTTCATTCACAGAAGATGAGGAGCATAATAAAGATAGTAAAATTCCTAGTACAAAACATGTCAAGCGTCCTTCTGCAGTTACATTTCGTGATCCAGAATCAAATTACATGATAGAAACCAATAGTGATGAGTTTTTCAATTCTGGGGTTGGAAGTATCCCTGTGAAGCAACGTGCTGTGAGACCAGGGAAGAAAGGCTCTTGCTATAGATGCCTTAAAGGGAATAGTCTCATAGTGAAGGAGGTTTGCATGGTTTGTAGTGCAAAGTATTGTAGCAAATGTGTGATAAGAGCAATGGGGTCAATGCCTCAGGGAAGAAAATGTGTTGATTGCATTGGTTATAGAATTGATGAGAACAAAAGGAGGAAGATTGGGAAATGTTCTAGGATGCTCAAACAGTTGTTGTCTGAGTCTGTGGCTAAAATCATGGAGGATGAAAGGTGTTGTGAAGCAAATCAAATACCACCAGAGCTTGTTATAGTGAACTGCCAACCTCTTAATAGGGAACAACTCATGTTGCTCCTCAAATGTTCAAACCCACCAAAACAACTAAAACCAGGATCCTATTGGTATGATATTGCATCTGGATTTTGGGGAAAGATAGGTCAACCACCTTGTGAAATTATCACCCCTCAGCTGCATGTTGGGGGTCGCTTTCCAAAAGATGCAAGCAATGGAAACACAAATGTGACTATAAATGGTCGTGAGATTACGAAAAAAGAGCTATGGATACTTAAGATGGCAGAAGTGCCATGTGAAGGAACACCTAACTTTTGGGTGAATGCTGATGGGTCATGGAAAGAAGAGGGACAGAAGAATGATAGGGGGCGTATATGGGATAAGCGTAGAACAAAGTTTGCTTGTAAAATTCTGTCTCTGCCAGTTCCTTCAAACTCTGGAACTCTTTCTGATGAAGGCGAAACAGATAACAAAGACAGCCTTCATCAGAAAACACTTCATAAATTTCTACTTGTTGGTTCTGCCAATTCTGGATCATGTACTATATTTAAACAGGCCAAGCTTCTGTATAATGTTCCTTTCTCTGAAAGTGAGCTCCAAAATATCAAGTTGGTGATCCAAAGCAACCTGTTTACCTACCTTGGTATATTGCTGGAGGGGCGTGAAAATTTTGAAGAAGAAAGTATGTTAGAGAATAAGAAAAGATGGCCTGTCGATGAATCCACTTCATCTGCAGGCAATACCGGTGATAATGTTGATACAACACCCTATTCCATTGGCCCACGATTGAAAGCTTTCTCAGATTGGCTACTCAAATGCATGGTGTCAGGTAACTTGGATACAATATTTCCAGCTGCTGCACGTGAATATGGCCCATTGGTGGAGGATTTGTGGAGGGACGAGGCCATTCAGGCAACATACAACAGGAGAAATGAACTAAAAATGCTACCTAGAAGTGCAAACTATTTTCTAGACAGAGCTATTGAAATTTCCAAGATTGACTATCAACCCTCTGATATGGACATCTTGTATGCTGAGGGGATATCTTTATCCAACAGCCTCACTTCAATGGAATTTTCATTTCCCAAGACAAGCAGTGAAGAGTCTTTGTCTACTGAGTATCAACATGAACCTTCTCTCAGATACCAACTGATCAGAGTACATCCTAAAAGCCTTGGAGAAAACTGCAAATGGTTGGAGATGTTTGAAGACACCGATGTTTTATTGTTCTCTGTGTCCTTAACTGACTATGATGAATACACTATAGACAGTAAAGGAGTTGCTACTAACAAAATGTTGGTAGCTAAGCAACTCTTTGAAAACATCATTGCTCATCCAACCTTCCGTAACAAGAAATTTCTTTTAATACTGACCAAGTTTGATTTGCTTGAGGAAAAGATTGAAGGAGTTCCTCTAACACAATGTGAATGGTTTAGTGACTTCAATCCAGTAATCAGTCACAATCACAAAAATGGTGGTAACAATGGCAATTGCCCTCCATTATCTCGAAGTGCTTTTCATTATATTGCTCTGAAGTTTAAGAGATTGTTCCATTCTCTTACTGGCCGAAATCTGTTTGTTTCACTAGTTACCGGTTTGGAACCTGATACCATTGATGAAGCTCTCAGATATGGTAGGGAGGTTATGGAGTGGGAAAAATGGGATCCCTCTTATGTAACTGAGAAGTCTGAGATAACTTCAACAAGCATTGAGGAGGCAACTTTCTCATAA 2631 0.3972 MASIIRKLRTSVPPVPVESEDSISSYEYSFAVVYNGPPLSCSIPEIPAFKIDQIPVATIAPSLSYDFSVPVVQPLGKTHHEKKQKISKPDSTVSPNLDSLAVVTSNSDVDVHESTTSTLASREVGDVPTNSDTIESGSSSNSISSEICSFTEDEEHNKDSKIPSTKHVKRPSAVTFRDPESNYMIETNSDEFFNSGVGSIPVKQRAVRPGKKGSCYRCLKGNSLIVKEVCMVCSAKYCSKCVIRAMGSMPQGRKCVDCIGYRIDENKRRKIGKCSRMLKQLLSESVAKIMEDERCCEANQIPPELVIVNCQPLNREQLMLLLKCSNPPKQLKPGSYWYDIASGFWGKIGQPPCEIITPQLHVGGRFPKDASNGNTNVTINGREITKKELWILKMAEVPCEGTPNFWVNADGSWKEEGQKNDRGRIWDKRRTKFACKILSLPVPSNSGTLSDEGETDNKDSLHQKTLHKFLLVGSANSGSCTIFKQAKLLYNVPFSESELQNIKLVIQSNLFTYLGILLEGRENFEEESMLENKKRWPVDESTSSAGNTGDNVDTTPYSIGPRLKAFSDWLLKCMVSGNLDTIFPAAAREYGPLVEDLWRDEAIQATYNRRNELKMLPRSANYFLDRAIEISKIDYQPSDMDILYAEGISLSNSLTSMEFSFPKTSSEESLSTEYQHEPSLRYQLIRVHPKSLGENCKWLEMFEDTDVLLFSVSLTDYDEYTIDSKGVATNKMLVAKQLFENIIAHPTFRNKKFLLILTKFDLLEEKIEGVPLTQCEWFSDFNPVISHNHKNGGNNGNCPPLSRSAFHYIALKFKRLFHSLTGRNLFVSLVTGLEPDTIDEALRYGREVMEWEKWDPSYVTEKSEITSTSIEEATFS* 877
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g00255 876 MobiDBLite consensus disorder prediction 106 145 - -
Rops1g00255 876 Pfam G-protein alpha subunit 455 843 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Rops1g00255 876 Gene3D - 495 642 IPR011025 GO:0007165
Rops1g00255 876 ProSiteProfiles G-alpha domain profile. 465 865 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Rops1g00255 876 PRINTS Alpha G protein (transducin) signature 635 657 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Rops1g00255 876 PRINTS Alpha G protein (transducin) signature 753 762 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Rops1g00255 876 PRINTS Alpha G protein (transducin) signature 468 483 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Rops1g00255 876 PRINTS Alpha G protein (transducin) signature 705 733 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Rops1g00255 876 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 464 843 IPR027417 -
Rops1g00255 876 FunFam Guanine nucleotide-binding protein subunit alpha 671 791 - -
Rops1g00255 876 SUPERFAMILY Transducin (alpha subunit), insertion domain 494 645 IPR011025 GO:0007165
Rops1g00255 876 Gene3D - 643 856 IPR027417 -
Rops1g00255 876 FunFam Extra-large guanine nucleotide-binding protein 3 496 646 - -
Rops1g00255 876 PANTHER OS01G0977800 PROTEIN 18 378 - -
Rops1g00255 876 SMART galpha_1 443 830 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Rops1g00255 876 SUPERFAMILY FYVE/PHD zinc finger 190 259 IPR011011 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g00255 Rops-Chr1 7115460 7121495 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g00255 - - gmx:112997598 1233.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops1g00255 1 7115460 7121495 Rops1g00255 1 7115460 7121495 ECH