LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Rops1g00251	ATGGGTCCTCTTACACCAACACCAACCATGGATGCCATCTATGATCTCATCGAAGAGGCCAAGCTTCGTTTTCTTTGGTGGGCTCTTTGTATTTTCGCCATTTCCTATTTCTTCACTCATACAAGTAAATCAATGTGGATGAATATACCAATGTCCATTCTGTTTGTTGCTGCTCTGCGAATGCTTCTGAATAAGGTGGAATTCCGTTGGAAGGTTCAGCCACCTAGATATCAAACTTATCTATCTCATTTAGAGAAAAAACAGTTGTCTCTGGATGATGCACGCCTCTCTACTAAACCTCCCCCACCCAAATGGAAGAAGAAGATTGATTCTCCTGTGGTGGAGGCTGCATTGAACGATTTCATCGATTTGATATTGAAGGATTTCGTGTTAAATTTGTGGTATGCAGACATTACTCCAGATGGGGAGTTTCCTGAGCAGATACGTGACTTAATCATGGATGCGATTGCTGAAGTGTCAGTGAGGGTTAGAGAGATAAACCTTGTTGACTTGCTCACAAGAGATATAGTTGATTTAATAAGTGATCATATAGACCTTTTCAGAAGAAATCAAGCTGCTATAGGTGTTGATGTTATGTTAACATTATCTTCTGATGAGAGGGATGAAAGATTGAAATTCCATCTGTTGAATTCTAAGGAGCTTCATCCAGCACTAATATCTCCAGAGAGTGAGTACAAGGTCCTTCAGCGGCTAACCAGTGGAGTATTAGCTACAGTACTAAGAAAACAAGAAGCTCAATGTCCTGTCATTCGATCTATAGCTCGGGAAATTATAACTTGCTTGATATTGCAACCTGTAATGAATTTGGCAAGCCCTGGGTATATCAATGAGCTGATTGAATCTCTTCTACTTATCCTCAATGAAGAGGGTGTAAATTGGATGGGTGGTGGCGATCAGTCGACTAATGCTACAAATTATAATCATGGTCATTCTGTTGCAGCTGGGGGTGGACATGATAATCACACTGCCTCTGCAGATTGGGCACAAATGTTGGAGGCTGCAACTCAGAGAAGAACTGAAGTTCTTATGCCAGAGAATCTTGAAAACATGTGGGCACGAGGAAGGAATTACAAAAGGAAAGAGAAGAAAAAAATCAAAGCTGGCTTTCAGGAGCCTTCTGCAAAAAATCCCACTACAGATCATGCACTGCATGATAGACATTTGGCTCAGGAAACATCAGTGAGCAAACCTGAAACATCTTCTGTTCCATTGCATACTGTGGTTTCAGATCCCCTACTAAATGTTGGAAGCACAACTAGGTCAGAGTCTTCACCTGATCATGACAAGGAATCATCTTCTGAAGCAGATCATCAACTTGATGAAGTGAATGATATGAAGGATTTCACTTCTAATAAGTATAAAATACCACTCAAGAGATCCAGCAGTTCTTCTGTCTTGGGAATCCAACCCCCTAAAGGAGGGTCCACAGTGTCAGAGTTAAACACCCCTGAATTTGAGAAGCATAGTGAAGGATTTCGGGGAATGGCTGTTAGGAGAGAGGGACAATTTGTTCCCAAGCTTCGGTGCCGGGTGATGGGAGCATATTTTGAGAAACTTGGATCCACATCTTTTGCCGTATATTCAATTGCGGTGACTGATGGGCAAGAGACAACTTGGTTTGTAAAAAGAAGATACAGGAATTTTGAGCGATTGCATCGACATCTAAAAGATATTCCCAATTACACATTACATTTGCCTCCCAAAAGGATATTTTCCTCTAGCACAGAGGATGCCTTTGTTCATCAGCGTTGCATTCAACTTGATAAATATCTCCAGGATATCCTATCAATAGCTAATGTTGCTGAACAACATGAAGTATGGGACTTTTTGAGTGTTTCCTCAAAGAATTACTCTTTTGGGAAATCTTCTTCAATGATGAGGACCCTGGCAGTCAATGTAGATGATGCTGTGGATGATATCGTACGCCAGTTTAAAGGTGTTTCAGATGGTTTAATGCGAAAAGTTGTTGGTTCATCATCCCCCACCAATGAAGGTTCTCCATCTACCACTCGGAACACTTCCTGGAATATGGATGAAATAGATAAAAGTATTTTGAGGCAAAATGCTGTGGATAGTGTGTTAAGCTCTGATAATGAGGAAGGTGAAGATAGAGAAGTAGCTGAAGATAATGGTTGGCATTCTGACAATGAATCGAGCTTGAAGGATTATTCACAACGGGGAATAAACCATGGTAATGAGTCTAGTAACTTAGATCTAGATAGAAAACATGATGTGGTGACGGAATCAAAGGTTGACAAAGATGTTCCAGCTACAAATTTCACTCCTGTTCCTGATAGTTTGGATGATCCAGTTGGAGTGCCTCCCGAGTGGACCCCACCTAACATGAGTGTCCCTATTCTGAATTTGGTTGACAACGTATTTCAGCTTAAGAAAAGAGGCTGGCTAAGAAGACAGGTCTTTTGGATATCAAAACAGATATTACAGTTGGTGATGGAAGATGCTATTGATGATTGGCTCCTGAGTGAGATTCATTGGCTACGGAGAGAGGATACGGTTGCCCAAGGGATTCAGTGGGTCCAAGATATCCTCTGGCCTGGTGGCGCCTTTTTTTTGAGAGTACAGACCCCTCAAGTGTTAATTGGTGGCAGTGTAATTGATCAAAAGCCTTTACAAACCGTAAGTGGATCTGGTGGAAAGAATATCAGCAAATCACAGTCAGGATCTTTCGAGCAACAGCTTGAGGCTGCTCGTAGAGCAAGTGACTTGAAGAAACTGCTCTTTGATGGAGCTCCAGCAGCCTTAGTGAGCTTAATTGGGCAGAAGCAGTACAGACGTTGTGCCAGTGATATATATTTCTTCACTCAGTCTTCCATATGTGTGAAGCAACTAGCTTATGCAATCCTTGAACTTCTGCTTATATCTGTCTTCCCTGAGTTGCGTAATGTTGTCATGAGTGTTCATGAGAATATGCATGTTCACCAACCTGTATAG	2973	0.4157	MGPLTPTPTMDAIYDLIEEAKLRFLWWALCIFAISYFFTHTSKSMWMNIPMSILFVAALRMLLNKVEFRWKVQPPRYQTYLSHLEKKQLSLDDARLSTKPPPPKWKKKIDSPVVEAALNDFIDLILKDFVLNLWYADITPDGEFPEQIRDLIMDAIAEVSVRVREINLVDLLTRDIVDLISDHIDLFRRNQAAIGVDVMLTLSSDERDERLKFHLLNSKELHPALISPESEYKVLQRLTSGVLATVLRKQEAQCPVIRSIAREIITCLILQPVMNLASPGYINELIESLLLILNEEGVNWMGGGDQSTNATNYNHGHSVAAGGGHDNHTASADWAQMLEAATQRRTEVLMPENLENMWARGRNYKRKEKKKIKAGFQEPSAKNPTTDHALHDRHLAQETSVSKPETSSVPLHTVVSDPLLNVGSTTRSESSPDHDKESSSEADHQLDEVNDMKDFTSNKYKIPLKRSSSSSVLGIQPPKGGSTVSELNTPEFEKHSEGFRGMAVRREGQFVPKLRCRVMGAYFEKLGSTSFAVYSIAVTDGQETTWFVKRRYRNFERLHRHLKDIPNYTLHLPPKRIFSSSTEDAFVHQRCIQLDKYLQDILSIANVAEQHEVWDFLSVSSKNYSFGKSSSMMRTLAVNVDDAVDDIVRQFKGVSDGLMRKVVGSSSPTNEGSPSTTRNTSWNMDEIDKSILRQNAVDSVLSSDNEEGEDREVAEDNGWHSDNESSLKDYSQRGINHGNESSNLDLDRKHDVVTESKVDKDVPATNFTPVPDSLDDPVGVPPEWTPPNMSVPILNLVDNVFQLKKRGWLRRQVFWISKQILQLVMEDAIDDWLLSEIHWLRREDTVAQGIQWVQDILWPGGAFFLRVQTPQVLIGGSVIDQKPLQTVSGSGGKNISKSQSGSFEQQLEAARRASDLKKLLFDGAPAALVSLIGQKQYRRCASDIYFFTQSSICVKQLAYAILELLLISVFPELRNVVMSVHENMHVHQPV*	991

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Rops1g00251	990	MobiDBLite	consensus disorder prediction	713	727	-	-
	Rops1g00251	990	MobiDBLite	consensus disorder prediction	661	683	-	-
	Rops1g00251	990	MobiDBLite	consensus disorder prediction	429	454	-	-
	Rops1g00251	990	ProSiteProfiles	PXA domain profile.	111	295	IPR003114	-
	Rops1g00251	990	SMART	PX_2	511	620	IPR001683	GO:0035091
	Rops1g00251	990	SUPERFAMILY	PX domain	514	621	IPR036871	GO:0035091
	Rops1g00251	990	CDD	PX_SNX19_like_plant	514	618	-	-
	Rops1g00251	990	SMART	PXA_3	111	296	IPR003114	-
	Rops1g00251	990	MobiDBLite	consensus disorder prediction	662	683	-	-
	Rops1g00251	990	MobiDBLite	consensus disorder prediction	385	399	-	-
	Rops1g00251	990	Pfam	Sorting nexin C terminal	808	951	IPR013937	-
	Rops1g00251	990	Pfam	PXA domain	111	289	IPR003114	-
	Rops1g00251	990	MobiDBLite	consensus disorder prediction	400	428	-	-
	Rops1g00251	990	MobiDBLite	consensus disorder prediction	700	746	-	-
	Rops1g00251	990	Pfam	PX domain	542	619	IPR001683	GO:0035091
	Rops1g00251	990	MobiDBLite	consensus disorder prediction	360	454	-	-
	Rops1g00251	990	Gene3D	-	515	629	IPR036871	GO:0035091
	Rops1g00251	990	PANTHER	PX SERINE/THREONINE KINASE PXK	107	986	-	-
	Rops1g00251	990	ProSiteProfiles	PX domain profile.	512	624	IPR001683	GO:0035091

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Rops1g00251	Rops-Chr1	7058651	7077303	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Rops1g00251	K17925		-	gmx:100804013	1575.07

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Rops1g00251	1	7058651	7077303	Rops1g00251	1	7058651	7077303	ECH