Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g00227 ATGGGCCCACTAAAAACGACGGTGCGTACGATCTCACAAGAAGCATTCGATGAATTGGTGAAGGAGAACATGGAGGATCTCGGAATGGAACCCGATGAGGCACTCCAAGATGCAATCCAAACCCTCACTCTCCAAGGCGTCGATCTCTCAGGTATCGTGACGTGCGTTCCGGGAGAGAGCAACCCGGTGATAGAGTGCTTGGAGAGGTTGAAGCATATGGAATCTGAAACGGATGATGAGAGGATAGTGGAAGTGTTCGATAAGCTCAACCAGTTGTGTGGTTCTGGGAATGGGAATGTGGCTATTGCTACTAAGAATGGTGGTGTGGAATTGGTTTGTTCTCTTTGTTCCAGTGCTAATAGATCTCACATTGTTCTTCTTTCCACTTTAAACGTTATGGCGTCACTGCTTCATGATGTTCAAAGTACCGGGACATTTCAGAATAGTAATGGACCAAAGATTGTAGTTGGTATCCTAAATGATAACAAGCCAAACATAGACATCTTAAATAGTGGCTTTCGTGTTGTGGCTTCGGCTGCCACCGGTGATGAGATTGTCAAGGAGTCATTCATGGAGTTGAAAGTTGATGAGCTAATTATGGAGATAATGTCCATTCATAAGAACACTGGCATTCAAAGTTTATATGATGCTATTCGTGTACTCTTAACACCTGACGACAATCGAGTTGTAGCTTCTCAGGTGTATGGTTATGCACGAAAATTTGCTAAGATTGGAATTGCAGAAGCCCTTATAGATTCTCTGCGTGCAGGACTTAGCTCACCTGACCTAGTTTCAGCATGCATCGCTTTGAAGGCCATTGCTGTAAATGATGAAATATGTAAATCCATTGCTGATAAAGGTGGTATTGATGCAATACTCAGATGTATAGATGACAGTGGTGAACAAGGCAACAAAGCTGTGGCCAAAGTTTGTTGCTCATTACTTTCTAAGTTAGCAGGAAGTGACATAAACAAGAGTGCAGTTGTTAGGAAAGGGATGGATAGGCTAATCAAACTTTCATCCAGATTTGCTGATGACCCTTCTGTTTTACAAGAGATCATGTCTATTATTTCTGTGCTTTCATTAAGATCCCCAGAAAATGCAGCCCGAGCCATTGAAGCTGGTGCTGGTGACCTTGCTATTCAAGCCATGGAGAAATTTCCTGCAGCACACCAAATGCAAAGAAACTCCTGTCTTATGATCAGAAATCTAGTAGTGAGAAATCCAGAGAACAGAACTATCTTGCTTAATAATGGAATTGAGAAATACATAAGGATGGCAAAGCAAGCACATGCCAACTGTAAGGATGCTGCTACAGATGCACTGAGGGATTTGGGACTTGATAATTACAACTTGTAG 1359 0.4246 MGPLKTTVRTISQEAFDELVKENMEDLGMEPDEALQDAIQTLTLQGVDLSGIVTCVPGESNPVIECLERLKHMESETDDERIVEVFDKLNQLCGSGNGNVAIATKNGGVELVCSLCSSANRSHIVLLSTLNVMASLLHDVQSTGTFQNSNGPKIVVGILNDNKPNIDILNSGFRVVASAATGDEIVKESFMELKVDELIMEIMSIHKNTGIQSLYDAIRVLLTPDDNRVVASQVYGYARKFAKIGIAEALIDSLRAGLSSPDLVSACIALKAIAVNDEICKSIADKGGIDAILRCIDDSGEQGNKAVAKVCCSLLSKLAGSDINKSAVVRKGMDRLIKLSSRFADDPSVLQEIMSIISVLSLRSPENAARAIEAGAGDLAIQAMEKFPAAHQMQRNSCLMIRNLVVRNPENRTILLNNGIEKYIRMAKQAHANCKDAATDALRDLGLDNYNL* 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g00227 452 SUPERFAMILY ARM repeat 66 445 IPR016024 -
Rops1g00227 452 Gene3D - 57 452 IPR011989 -
Rops1g00227 452 SMART arm_5 408 447 IPR000225 GO:0005515
Rops1g00227 452 SMART arm_5 276 320 IPR000225 GO:0005515
Rops1g00227 452 SMART arm_5 364 406 IPR000225 GO:0005515
Rops1g00227 452 SMART arm_5 321 362 IPR000225 GO:0005515
Rops1g00227 452 PANTHER UNCHARACTERIZED 9 448 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g00227 K24166 - gmx:100527792 704.516
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops1g00227 1 6611547 6616606 Rops1g00227 1 6611547 6616606 ECH