Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g00226 ATGGCTGTGAAGATTGCAAAGGGACTCATCATTCTAGTCATAACTGCTTCAATGTTAGCGGTGAGCATGGCCAACAAGGACTGGTCCTTTGGTTTCAACTACACAGATTGGTGGTCCAGATTTGGGAATCATCATCACAACAAAACACAACAACAACCCAAGCAGATCCTCGTGGGTGGTTCCGAGCATTGGCACTTTGGTTACAACTACACTGATTGGGCTATCAAGAATGCCCCATTTTACATCAACGATACTCTAGTTTTCAAGTATGATGCTCCAAACGCTACCACTTTCCCACACAGCGTGTACATGTTCAAAAATTTTTGGAGCTTCTTGAAGTGTGACATTAAAAGGGCTAAGATGCTGGCAAATCCCAAACAAGGTGCAGGAGAGGGCTTCAAAATTGTGTTGAAAAAATGGCAACCTTACTTCTTTGCTTGTGGTGAGAGAAATGGCTTCCACTGCAACAATGGGACTATGAAATTCGTCGTGATGCCAATGCTTCGTCCCTTCTGGTCATGGCCATGA 528 0.4413 MAVKIAKGLIILVITASMLAVSMANKDWSFGFNYTDWWSRFGNHHHNKTQQQPKQILVGGSEHWHFGYNYTDWAIKNAPFYINDTLVFKYDAPNATTFPHSVYMFKNFWSFLKCDIKRAKMLANPKQGAGEGFKIVLKKWQPYFFACGERNGFHCNNGTMKFVVMPMLRPFWSWP* 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g00226 175 Pfam Plastocyanin-like domain 64 158 IPR003245 GO:0009055
Rops1g00226 175 Gene3D - 52 167 IPR008972 -
Rops1g00226 175 ProSiteProfiles Phytocyanin domain profile. 54 168 IPR003245 GO:0009055
Rops1g00226 175 PANTHER GLYCINE-RICH PROTEIN-LIKE 2 170 - -
Rops1g00226 175 SUPERFAMILY Cupredoxins 54 166 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g00226 Rops-Chr1 6600713 6601986 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g00226 - - gmx:100813442 330.872
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops1g00226 1 6600713 6601986 Rops1g00226 1 6600713 6601986 ECH