Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g00069 ATGGATCAATCTCAGAGTCAGCAAAGATCAGCATCAGCAGCTACAACAACAACAACAACAACAACAACAGCGTCACGTTCGTACCAATTCCACCCTGCTCGTGCACCCATTCTCGATCTCTTCAACCTCTATTTAGGACTTGGAAGAAACAGTCGCCAGAAACCCGAAGACTCACTCCGCGAACCACCGAACAAAACACAAAAACGCGTGCATGCTCTTAACCGAGAGCTTCCTCCGCCGAATGAGCAGTTCATTCTAGATTTTGAGCAACTTCAGAGCCAGTTTCCTGATCAGGATCAATTTCGTGCTGTGACAGAAGCTATTCTTATATCACTGGTCGTCCAGTGTAGTGGTCATGGACCACGATCAGACTTTCTTCTATTTGTTTTACGGAGCTTGTGGAGTATTGGGTGCATTAACTGGGACACCTATCTACCATCCCTTCTTTCTTCAGTTTCTTCCGCAGAATTGCCAGTCGGCCAACTGAGTCAAGCAGTGCCAATGGTTTCCTCGCAGTCGGGAATGCTGCCACCTCCAAGCACAATTGCTAATTCTTCTAATTTTCAGTCTTCAAATCCTGCATCTCCATTGCCTTCTGTTCATACTGTTGGCTCCCCTGCACAGTCAACTATGGAACCATTATCTTGTGCAGCTTTATCTCCTGTCAAATCATCTGATATTTCCTCCACTGGACAACAATCTAAACTAAGAGGCAGTCCATCTGTTAGAAATAATGATATTAGTAATAGCAGCCTTCGCCAGCTATGTTGCAAGATTATTTTGACTGGTCTTGAGGTCAATTTAAAACCCGTGACATATGCTGAAATCTTCCACCATATGTTGAATTGGCTGGTTAATTGGGACCAGAGGCAACAGGGAGTTGATGAATCTGATGTAATAAAATCATGGAGACCTGACAAAGCCGTAATTGCATGGCTACACCGTTGCTTGGATGTGATCTGGCTTTTAGTTGATGAGGGAAAATGTCGGGTGCCCTTTTATGAATTATTGCGTAGTGATTTGCAATTCATAGAGAATATTCCTGATGATGAAGCATTATTTACACTTATCTTGGAGATCCATAGGAGACGAGATATGATGGCTATGCACATGCAAATGTTAGACCAGCATCTTCATTGCCCTACATTTGGGACTCATCGGATCCTGAATCAGACGACACCTTTTGTTTCAGGTGAAGCAGTAGCACACCTGCGACTATCACCGATTGCATATTTAAGTGTACTTGGAGAACCATTGCACGGAGAGGATATTACAAACTCAATTCAGAAGGGAAGCTTGGATTGGGAGAGAGCGGTATGCTGCATAAGGCATGCCCTCCGTACTACACCATCACCTGATTGGTGGAGACGTGTGCTGGTACTGGCTTCTTGCTATAGGCCTTCATCTCAAGGGCCTACTGCTGGTGCTGTTTTTTCTTCAGAGATGATCTGTGAGGCAACTATTGATAGAATTGTTGAACTATTGAAATTGACAAATTCAGAGATAAATTGCTGGCAGGACTGGCTTGTCTTCTCTGATATTTTCTATTTCCTAATGAAAAGTGGGTGCATTGATTTTGTTGATTTTGTGGACAAGCTGGTTTCACGTATTACAGAGGGTGATCATCATATGCTTAAGACAAATCATGTGACTTGGCTGCTTGCACAGATAATTCGAATTGAGCTGGTTATGAATGCTTTGAATTCAGATTCTAGAAAGGTGGAGACAACCAGAAAGATTTTATCATTTCATAGAGAAGACAGAAATTCGGATCCCAATAATCCTCAAAGTATCTTGCTTGATTTTGTAAGCAGTTGTCAAAATTTACGTATTTGGTCATTGAACACATCAACCAGAGAATATCTGAACAATGAACAGCTTCAAAAAGGAAAGCAAATAGATGAATGGTGGAGACAAGCAAGCAAAGGGGACCGAATGATGGATTATATGAAGATGGATGAACACTCAATAGGGATGTTTTGGGTTGTGACCTACACAATGGCACAGCCTGCTTGTGAAACAGTAATGAATTGGTTAACTTCTGCTGGAGTTATCGACTTGCTACCAGGAATCAATCTACAACCAGCTGAGAGATTAGTGGCTACACGAGAAGTTAGCCCACTGCCCATGTCATTGTTATCTGGATTTTCTATGAATTTATGTTTGAAGCTGTCTTATCAAATGGAAGATTCTCTGTTTTCTGGGCAGGTTGTACCCAGCATTGCAATGGTTGAAACTTATACTAGATTGTTGCTTATTGCACCTCATTCACTGTTCCGTTCACATTTCAATCATTTGGTGCAAAGAAGTCCTTCTTTGTTGAGCAAGCCTGGGGTAACACTTTTGGTGCTTGAGATATTAAACTATCGACTACTTCCACTTTACAGGTACCAGGGAAAAAGCAAAGCCTTGATGTATGACGTTACAAAGATCATTTCTGCTCTAAAAGGAAAACGAGGAGATCATCGAGTGTTTAGATTAGCTGAAAATCTGTGCCTGAATCTTATCTTCTCGTTGAGAGATTTTTTCTTGGTTAAAAGGGAAGGAAAGGGCCCAACAGAATTTACTGAAACTTTGAATCGAGCGACTGTTATAACACTTGCTATCCTTATTAAAACTCGTGGGATTGCAGATGCTGATCACCTGCTTTATCTCCAAAATATGTTGGAACAAATAATGGCAACTAGCCAGCATACATGGTCAGAAAAGACACTACGTCACTTTCCTACTGTTCTGCGTGAAGCATTGAGTGGTCGAACAGATAAAAGGAGCCTTGCAATACAAGCATGGCAGCAGGCAGAAACCACTGTGATACACCAGTGCACCCAGCTTCTTTCTCCATCGGCTGATCCTAGTTATGTTATGACCTATCTCAGTCACAGTTTTGCTATGCATCGACAATATTTGTGTGCTGGTGCATTGATATTAATGCATGGCCATGCGGAAAACATTAACAGTGGAAATCTGGGACGCGTCCTGCGGGAATTTTCTCCTGAAGAAGTGACATCTAACATTTACACGATGGTGGATGTTATGCTTCATCATATGCAGATAGAGCTTCAACAAGGACATTCGTTGCAGGACCTTATGTTAAAAGCTTGTGCAAGCCTTGCCTTTTTTGTTTGGACAAATGAGTTACTTCCTTTGGATATCTTGCTTCTAGCACTTATTGACCGTGATGATGATCCACATGCTTTGCGTATTGTGATTAGTCTACTTGATAGGCAAGAGCTTCAACAAAGAGTAAAACTCTTTTGTTTAACTCGCGGGCACCATGAGCATTGGCTTCACTCAGGAACATTCAAGCGGGTTGAGCTACAAAAGGCTCTAGGAAATCACCTTTCATGGAAGGATAGGTATCCAGTGTTCTTTGATGATATTGCAGCACGTTTGCTTCCAGTCATCCCCTTAATTATTTATCGACTTATTGAAAATGACGCAATGGATACAGCTGAAAGACTATTGGCCATATATACTCCATTGCTTGCTTATTACCCTCTAAGATTTACATTTGTTCGCGATATACTTGCATACTTTTATGGTCATCTTCCTGGAAAGCTCATTCTTCGAATACTCAATGTACTTGACATCAGTAAGATTCCTTTTTCAGAATCATTCCCACAGCAAATAAGTTCGTCAAATCCTGTCATGTGCCCTCCTCTGGATTATTTTACAACTCTATTATTGGGAATAGTGAATAATGTTATCCCCCCGTTACATAACAATTCAAAATCTGGATCCGTGGGAGATGCGTCAAACAATGCACTGCGTATTGCACAAAATAAGCCTCCAGCAGTATCTCAGTCTGGGCCAACAAATGCTTCTGATGGCCAAAAGGCATTCTACCAAATTCAGGATCCTGGCACATACACCCAGCTGGTTCTTGAGACTGCTGTCATTGAAATACTTTCCCTTCCAGTATCTGCCTCTCAGATAGTACAATCACTTGTTCAAATTGTTGTTAATATACAGCCAACATTGATCCAGTCCAGCAATGCTCTCCACAGTGGTTCAAATGGTGTAGGGCAAGGTTCAGTGTTACCAACGTCACCTTCAGGAGGAAGCACAGATTCCTTAGGTGCAAGCAGATCAACTCCTTCAGTTTCTGGAATAAACACTTCTAACTTTGCTTCTCGAAGTGGTTATACATGTCAACAACTGTCTTGCTTGTTGATTCAAGCTTGTGGCCTCCTACTGGCTCAGCTTCCTTCTGATTTTCACTCTCAACTTTACTTGGAGACAACACGTATTATAAAAGAGAACTGGTGGCTTACAGATGGGAAAAGGCCGCTTGGGGAAATAGACTCTGCTGTTGGCTATGCTTTGTTAGATCCAACATGGGCTGCACAGGACAATACCTCCACAGCCATTGGGAATGTGGTTGCCTTGCTTCATTCTTTCTTCAGTAACCTCCCTCAAGAATGGCTTGAAGGGACCAATGTTATCGTCAAGCAACTTCGGCCAGTAATGTCAGTTGCAATGTTGAGGATAGCATTCCGTATAATGGGTCCACTCCTTCCAAAACTCTCCAACGCTCATGCACTTTTCAACAAGACCCTATCATTACTATTAGGTATATTAGTGGATGTATTTGGAAAAAACTCCCAGACATCAGTTGCTGTTGATGCATCAGAAATAACAGATATCATTGACTTCCTGCATCATGTGGTTCATTATGAAGGGCAGGGAGGGCCTGTGCAGGCTGGCAGCAAACCCCGACCCGAGGTTTTGGCTCTCATTGGAAGGGCGTCAGAGAGTTTACGGCCAGACATTCAACATCTGCTTTCACACCTAAATCCTGATGTGAATTCTTCTGTTTACGCTGCATCTCATCCAAAGTTGGTCCAGAATCCGGCTTAG 4860 0.423 MDQSQSQQRSASAATTTTTTTTTASRSYQFHPARAPILDLFNLYLGLGRNSRQKPEDSLREPPNKTQKRVHALNRELPPPNEQFILDFEQLQSQFPDQDQFRAVTEAILISLVVQCSGHGPRSDFLLFVLRSLWSIGCINWDTYLPSLLSSVSSAELPVGQLSQAVPMVSSQSGMLPPPSTIANSSNFQSSNPASPLPSVHTVGSPAQSTMEPLSCAALSPVKSSDISSTGQQSKLRGSPSVRNNDISNSSLRQLCCKIILTGLEVNLKPVTYAEIFHHMLNWLVNWDQRQQGVDESDVIKSWRPDKAVIAWLHRCLDVIWLLVDEGKCRVPFYELLRSDLQFIENIPDDEALFTLILEIHRRRDMMAMHMQMLDQHLHCPTFGTHRILNQTTPFVSGEAVAHLRLSPIAYLSVLGEPLHGEDITNSIQKGSLDWERAVCCIRHALRTTPSPDWWRRVLVLASCYRPSSQGPTAGAVFSSEMICEATIDRIVELLKLTNSEINCWQDWLVFSDIFYFLMKSGCIDFVDFVDKLVSRITEGDHHMLKTNHVTWLLAQIIRIELVMNALNSDSRKVETTRKILSFHREDRNSDPNNPQSILLDFVSSCQNLRIWSLNTSTREYLNNEQLQKGKQIDEWWRQASKGDRMMDYMKMDEHSIGMFWVVTYTMAQPACETVMNWLTSAGVIDLLPGINLQPAERLVATREVSPLPMSLLSGFSMNLCLKLSYQMEDSLFSGQVVPSIAMVETYTRLLLIAPHSLFRSHFNHLVQRSPSLLSKPGVTLLVLEILNYRLLPLYRYQGKSKALMYDVTKIISALKGKRGDHRVFRLAENLCLNLIFSLRDFFLVKREGKGPTEFTETLNRATVITLAILIKTRGIADADHLLYLQNMLEQIMATSQHTWSEKTLRHFPTVLREALSGRTDKRSLAIQAWQQAETTVIHQCTQLLSPSADPSYVMTYLSHSFAMHRQYLCAGALILMHGHAENINSGNLGRVLREFSPEEVTSNIYTMVDVMLHHMQIELQQGHSLQDLMLKACASLAFFVWTNELLPLDILLLALIDRDDDPHALRIVISLLDRQELQQRVKLFCLTRGHHEHWLHSGTFKRVELQKALGNHLSWKDRYPVFFDDIAARLLPVIPLIIYRLIENDAMDTAERLLAIYTPLLAYYPLRFTFVRDILAYFYGHLPGKLILRILNVLDISKIPFSESFPQQISSSNPVMCPPLDYFTTLLLGIVNNVIPPLHNNSKSGSVGDASNNALRIAQNKPPAVSQSGPTNASDGQKAFYQIQDPGTYTQLVLETAVIEILSLPVSASQIVQSLVQIVVNIQPTLIQSSNALHSGSNGVGQGSVLPTSPSGGSTDSLGASRSTPSVSGINTSNFASRSGYTCQQLSCLLIQACGLLLAQLPSDFHSQLYLETTRIIKENWWLTDGKRPLGEIDSAVGYALLDPTWAAQDNTSTAIGNVVALLHSFFSNLPQEWLEGTNVIVKQLRPVMSVAMLRIAFRIMGPLLPKLSNAHALFNKTLSLLLGILVDVFGKNSQTSVAVDASEITDIIDFLHHVVHYEGQGGPVQAGSKPRPEVLALIGRASESLRPDIQHLLSHLNPDVNSSVYAASHPKLVQNPA* 1620
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g00069 1619 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 23 53 1617 IPR021629 -
Rops1g00069 1619 MobiDBLite consensus disorder prediction 173 208 - -
Rops1g00069 1619 MobiDBLite consensus disorder prediction 223 245 - -
Rops1g00069 1619 Pfam Mediator complex subunit 23 503 1227 IPR021629 -
Rops1g00069 1619 MobiDBLite consensus disorder prediction 1 27 - -
Rops1g00069 1619 MobiDBLite consensus disorder prediction 1339 1367 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g00069 Rops-Chr1 1949901 1997830 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g00069 K15166 - gmx:100798789 2969.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops1g00069 1 1949901 1997830 Rops1g00069 1 1949901 1997830 ECH