Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops1g00037 ATGGCTCAAATTTGTGTCCTTGAGGCAAGTGTGCAACTCAAATCATGTGCTCAAAAGTTCTTTAATTTCCTCAAGAGCCAAAACCAGCACATTCCAAATAAAACACACACTGAAAATTTGCATGGTGTTGAGATTCACAAAGGTGACTGGAAGACTCCTGGCTCTGTCAAGATTTGGAAGTATACCTTAGAAGGAAAAGAGGAGATATTCAAGGAAAGGATTGATGTGGATGAAGTGAACAAGACTATAACTTATGTTGCAGTGGGAGGGAATGTGTTGGAGTTGTACAAAAGCTACAAGGCCATTGTGAAGGTTGAGAATGGAACATTGAAATTGAGATTAGAATATGAGAAGCTCAATGATGACATCCCACCTCCAAAGAAATACCAGCAGTTTGTCCTTAATATTGTCAGCGACATTGATGCAAACTTAGTCAAAGGTTAA 444 0.3896 MAQICVLEASVQLKSCAQKFFNFLKSQNQHIPNKTHTENLHGVEIHKGDWKTPGSVKIWKYTLEGKEEIFKERIDVDEVNKTITYVAVGGNVLELYKSYKAIVKVENGTLKLRLEYEKLNDDIPPPKKYQQFVLNIVSDIDANLVKG* 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops1g00037 147 SMART Bet_v_1_2 2 147 IPR000916 GO:0006952
Rops1g00037 147 CDD Bet_v1-like 6 142 - -
Rops1g00037 147 Gene3D - 1 146 IPR023393 -
Rops1g00037 147 SUPERFAMILY Bet v1-like 1 146 - -
Rops1g00037 147 PANTHER POLYKETIDE CYCLASE/DEHYDRASE AND LIPID TRANSPORT SUPERFAMILY PROTEIN 1 146 - -
Rops1g00037 147 Pfam Pathogenesis-related protein Bet v 1 family 7 146 IPR000916 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops1g00037 Rops-Chr1 1267373 1268616 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops1g00037 - - pvu:PHAVU_003G032100g 234.187
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops1g00037 1 1267373 1268616 Rops1g00037 1 1267373 1268616 ECH