Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g03968 ATGAGGATTACGGTGGAGGAGCCAAACAGCTCTCAAACTCCCAAAGACGAAGTCGAATGGGTCCCACTTCCCAAACACCCTATCTTCTCCTCCACCTCACGCGGCGGTTCCGGCACCGCCGCCGCCATTTACCGAAACCTTCTAGCCTGGGACGGAGCCTCTCGCCTCTATTTCTGGGACTCCGACAACAACTGCCTCCATCGCCTCTCTCTTCGCCTCGGCGACCCCGATCCCACTTCCGTTCTCGCTGCTTCACCTTCCAAGGTGTTGGAAGCTGATGTGGAGCTCAACTTTGATGTGCATAAAATCTCCATCAACAGGAACGGAACAGTTATACTCCTTTATGGTTCTGAAAGACTCTGCGTTATGTATCTCTATGGACGCTCTTCCAAAAAAGATGTAAATTTGATTTGCAGGACCATTGATGTTGGTTCTCAAACATATTCACCTGGCAACAATGATATTCGTGTATTAGAAGCATTGTGGCACCCTTGCAGCGATACTCATTTGGGAATCCTTTCTTCTGACTCTGTTTTCCGGCTTTTCAATCTGGCTGTGGATCCTTTGCAACCAGAGCAAGAATATTATTTACAGCCTGTGGAGCCAGGTAGATCCAGAAATGCCTCATCAATGTGCCCAGTTGATTTTTCTTTTGGGGGAGATCACTTATGGGACAGGTTCAGTGTTTTCATTTTGTTCGGTGATGGGGCTATCTATGTACTTTGCCCTGTTGTTCCATTTGGAAGTCTCTTCAAATGTGAGTCTTTATTAGAAATATACAATGATGCTCATACAATTGGGCTAATGTCAGCCAACTCCGTAGCGGCTAGTAATTCGAAGTTGGCAATCTCCTGGCTAGAAGCAACATTTCCTGAGTTACAGAACCAAGAAACTGGAGGAGACAGCCTGTCTTTGCTAAGAGCGCATGCTTATGCTTTATTTGATGCATCTCTTGTCTTGCAGGGACCTCTGCGAAGAGTAGGTCAGAGTGGAAATGAAGATTCAGTTGGCCGTAGTGCAGAATGTGAAGGTCGTGCTGTTAGTTTTCTTTACAATTTAGTCAGCAAAGACTCTATTTTGGTGTCTGCCTGGAGTGGTGGGCAATTACAGATAGATGCTCTAGCCGATGAAATCCAACCTGTTTGGAGTGTTGGCAATCCACCTCGTCTTTGTGTTGATTCCCATGACCAAATTCTTGGCCTTGCTATGATTTGTGAGTCAATTGCCAGCAGCCGTCTGGAGAAGCTTGATCATAATGCCTGGTTGGGTAATCCACCCCCTCTGCTGAGACTGGCTATTGTCGATTTGGCTCTGCCACGAAGAGCAGAAAGTGGTTATAATATCTCATTGTTCACTGATACCCTTATGCCAGAAAGAATATATTCCCTTCATGATGGAGGGATTGACTCAATAGTGTTGCATTTTCTTCCATTTACAAGTCAAACAAATGGCAAGGATGATACAATGAGAATACCTTCTGTGCATCCTGTTCTAAATACTTGCCAGAGTGGATGCACTTCAGAGCCTTCACTTTGTGGTTTTGTGTCATTGTCAGATTCATTTGGATATTCGTGGATTTTAGCTGTTACTCTTTCTCAAGAGTGTGTTGTGCTTGAGATGAAAACTTGGGACCTCTTGCTTCCAGTAAGCATTGATATGGAGAAGAAACCCATTCAGTCAGAGGGGCAATCAAAAGACAGAGAGATACCAACAATAATTAGCAAGGAACTACTTAGTGGGCCCAAAGAGGCACTTGTTCCTTGGGCCTCTCCAAGTTTGCGTTCGGTTGCAGCTGATTCAATTGAAGGCCGATCAACATTACATCAGTATTTCAAGCTGTTTCATGAAACTTACGTGGAGTATGCACATAAGGTGTACCTGGAACTCAAGCATCACGCACCTCAGTTGAAGAAAATCATTAATGACCAACATTCTCGTTTAGGCAATGCACAGCAGAAACTTTTGAAAGTTGAGGAGAAACAGTCTATATTACAGAAAAGGATAGATCGTGCAATTCAAATGCACAATTCTTTGGAAGAGCGCTTACAACAATTAAGAAACTTACCTTGTGCTCAGAAAAAACCACTGTCTAGAGCAGAGCGACAGTTTAAGTCTGAGCTTGACCATTTCAAGGAAGTTGAGTTGGATGCTCTGCATTCTTCTGTTGATGCGCTAAGTGCAAGGCTGAGAAGGCATATGCAAGCTTCCAAAGCTAGTCACCAACAACCGAAAATATCAGGGAAGAAAATTTCTACTGGAGATGACCAGATATCGATGCTCAAATCGTCGCTTGAAAAACTCTCACTTGTAAATACTGACAATTCAAAGAAAGTTAAGATTGTTGAGTCTACATTGAGAAACAAAGAAAGAAGCTGCGGAGAATCAAGCCTGCCTATGCTTCAAAACTCGTAG 2412 0.4391 MRITVEEPNSSQTPKDEVEWVPLPKHPIFSSTSRGGSGTAAAIYRNLLAWDGASRLYFWDSDNNCLHRLSLRLGDPDPTSVLAASPSKVLEADVELNFDVHKISINRNGTVILLYGSERLCVMYLYGRSSKKDVNLICRTIDVGSQTYSPGNNDIRVLEALWHPCSDTHLGILSSDSVFRLFNLAVDPLQPEQEYYLQPVEPGRSRNASSMCPVDFSFGGDHLWDRFSVFILFGDGAIYVLCPVVPFGSLFKCESLLEIYNDAHTIGLMSANSVAASNSKLAISWLEATFPELQNQETGGDSLSLLRAHAYALFDASLVLQGPLRRVGQSGNEDSVGRSAECEGRAVSFLYNLVSKDSILVSAWSGGQLQIDALADEIQPVWSVGNPPRLCVDSHDQILGLAMICESIASSRLEKLDHNAWLGNPPPLLRLAIVDLALPRRAESGYNISLFTDTLMPERIYSLHDGGIDSIVLHFLPFTSQTNGKDDTMRIPSVHPVLNTCQSGCTSEPSLCGFVSLSDSFGYSWILAVTLSQECVVLEMKTWDLLLPVSIDMEKKPIQSEGQSKDREIPTIISKELLSGPKEALVPWASPSLRSVAADSIEGRSTLHQYFKLFHETYVEYAHKVYLELKHHAPQLKKIINDQHSRLGNAQQKLLKVEEKQSILQKRIDRAIQMHNSLEERLQQLRNLPCAQKKPLSRAERQFKSELDHFKEVELDALHSSVDALSARLRRHMQASKASHQQPKISGKKISTGDDQISMLKSSLEKLSLVNTDNSKKVKIVESTLRNKERSCGESSLPMLQNS* 804
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g03968 803 Pfam Nuclear pore component 23 219 IPR019321 -
Rops11g03968 803 Pfam Nuclear pore component 447 781 IPR019321 -
Rops11g03968 803 SUPERFAMILY WD40 repeat-like 52 240 IPR036322 GO:0005515
Rops11g03968 803 Coils Coil 640 688 - -
Rops11g03968 803 PANTHER NUCLEOPORIN NUP84-RELATED 12 790 IPR037700 GO:0000055|GO:0000056|GO:0006913|GO:0017056
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g03968 K14318 - gmx:100801853 1384.01
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops11g03968 11 73852834 73858366 Rops11g03968 11 73852834 73858366 ECH