Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g03967 ATGGGTTTTTCATCAAAAGAAGAGAAATCCATAAGGATATGGAGGGGTGTGAAGACTGTGTTCTTCTTGATCACCATGGTTCTATCACTTCTTCTATTCTCCGCACCGATGCTTCTGGTTATTGCCGATGCTCTTGTTCCTTCTGCTTTGCTCTCTACACTTTCCCCTGCTTCTCTCCCCATGGAAACTCTCTCTTCCCATTTCCACAACTACGATTTTCGATACTCTCTCATTGATATACCCCTCGTATCCGTCATAAGATCCTTCATCATCTTCTGTGTCTATAGTTTGTGTGATGGACCTAGACTTTCACGAGGACCCTATTTGGGGATCACGACGATGTGTTCTGTTTTGTCTCTGATATTTGTTTCGTTCAAAGCTGTTTACATATTCAGCCAGCGAAGTGGGTACGTTGGAGTCTCCGAAATAGCTTTGTTCGTGTGTTCTTGTGCGTTGGCAGTGGGGCATATTGCGGTGGCATATAGAACAAGTTGCAGAGAAAGACGAAAGCTATTGGTCTACAAAATTGACATTGAAGCTATTTCAGCTTGTACAAACGGGTATCCCAGGTATCCGAAGAAGATACTTCAAGAAGAAAGGATCAAATGA 609 0.4302 MGFSSKEEKSIRIWRGVKTVFFLITMVLSLLLFSAPMLLVIADALVPSALLSTLSPASLPMETLSSHFHNYDFRYSLIDIPLVSVIRSFIIFCVYSLCDGPRLSRGPYLGITTMCSVLSLIFVSFKAVYIFSQRSGYVGVSEIALFVCSCALAVGHIAVAYRTSCRERRKLLVYKIDIEAISACTNGYPRYPKKILQEERIK* 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g03967 202 PANTHER ALPHA/BETA HYDROLASE RELATED PROTEIN 1 201 - -
Rops11g03967 202 Pfam Cholesterol-capturing domain 62 152 IPR019498 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g03967 Rops-Chr11 73833524 73836226 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g03967 15 193 Miscellaneous Gene Families AT1G80280 42.424 1.21e-36 132
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g03967 - - gmx:100811069 330.102
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops11g03967 11 73833524 73836226 Rops11g03967 11 73833524 73836226 ECH
Rops11g03967 11 73833524 73836226 Rops9g00837 9 12930651 12941300 PCT