Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g03936 ATGATTAACTCCACTTCTTCTATCCTTCACCATAACAACCACTTCCTATTCTCCTTTCGCTCCAAAGCTTCCACTTCGAATTCGAATTCACACTCTCACTTACAATCACAACCTCTCTCTTTTGCCAACTCCCTATCACTTCAACCCTCTACGCCCTCATCGTCATGTTGCCGTGTAGCGCGCGTCTCCACGGAGGCTTTGGAGTTATCGCCGCCGCAGCCGGGATTCAATTTCCGCCTCGAAATCGCCAGGCTCACTGCACTCCGTGAAGAGCTCGCCGGCTGCGTCGCTCTCGAGGAGAAGCTCCGAGTGATCGACGCCGATTCCAGAGTGAGGAAGTTCTTCGGTTCCCATCGCCGGAACGGTGGTTTCGCTAGGATTTTGGATGCTCTCCGATTGGATTCCGGCGACTTGTTCTTGCTCAAGTGCTTGGTTGCCGCGGGGCAAGAGCACGTGCTGTGTTTGGGCGAAATGACGCCGTTGGAGTCGCCGGCGGCTCATGCTGGCTCCGTGAAGAGCGCGCTTTATGCGTTGGCGGAGATGATTGAGAACTGGGATTCGCATAACAGTAATTCGGGTGCGGGTTTTGGGAAGACGTGGACGGGGATGGCTTTGGAGGAGAATGAAATTCGGGAGTTGAACAAGTTGTTAGAGACTTTGGCACAAATTGAACGCTTCTATGACTGCATTGGAGGAATTATTGGATATCAGATAACAGTACTGGAACTTCTTGTCCAAAAATTGTTCGAGAGACAGAATATAAACTGGTCTCAGCATATGCATGAAGTGAAAGAATGTCAAATTATGGGAATCAATGCACCTAATGGGCTTGACCTTTCTGAAAATACAGAGTATGCATCTCAAGCAGCTTTATGGGGTATAGAGGGTTTGCCTGACCTAGGTGAAATTTATCCTTTGGGAGGCTCTGCAGACAGGCTTGGTTTAGTTGATCCTACCACTGGTGAATGCCTGCCTGCAGCAATGCTACCATATTGTGGAAGGACTTTGTTGGAAGGTCTTATAAGAGATCTTCAGGCTAGAGAATTCTTGTACTTCAAGTTATATGGAAAACAATGCATCACACCTGTTGCAATAATGACAAGTTCCGCAAAGAATAACCACAAACACATCACTTCTCTATGCGAAAGGCTTCATTGGTTTGGAAGAGGTCAATCAACTTTTCAACTTTTTGAGCAGCCTCTTGTTCCAGTTGTTGGTGCAGAAGATGGGCAGTGGGTGGTCACCAAACCATTCATTCCCTTGAGCAAGCCTGGTGGTCATGGTGTCATATGGAAACTTGCTCATGACAATGGCATCTTCAAATGGTTTTGTTGTCAAGGAAGAAAAGGTGCAACTGTGCGCCAAGTCAGTAATGTTGTGGCAGCTACAGATTTAACCCTCCTGGCCTTAGCAGGGATTGGTTTACGTAAAGGAAAGAAACTGGGGTTTGCATCTTGTAAGCGTATCGCGGGTGCCACAGAGGGAATTAATGTGCTGGTGGAGAAGAGAAGTCTTGATGGGAACTGGGAATATGGTGTGTCTTGCATTGAATACACTGAGTTTGACAAGTTTGGGATTACTGATGGACCTCTTGCTCCAAAAAGTTTGCAGGTAGAGTTTCCAGCCAATACAAACATCTTATATGTTGATTTGCCTTCTGCGGAGCTAGTTGGATCAAGTAAGAATGAAAATAGTTTACCAGGAATGGTGCTAAATACAAGAAAGCCAATAGTTTATGCAGATCAGTTTGGGAGACAGTGCAGCGTCCCTGGTGGCAGACTAGAGTGCACAATGCAAAATATAGCAGACAATTATTTCAATTCATATTCATCTAGGTGTTATAATGATGTAGAAGATAAGCTAGATACATTTATTGTATATAATGAACGAAGAAGGGTTACCTCATCTGCTAAGAAAAAAAGAAGACATGGAGACAAATCTTTACACCAGACACCTGATGGCTCGCTATTGGATATCTTACGAAATGCTCATGATCTTCTTTCACAATGTGAGATAAGACTTCCTGAGATTGAAGCTAATGAGAATTATGTTGATTCGGGACCACCATTTCTCATCCTTCTTCATCCTGCTCTTGGTCCTCTTTGGGAAGTCACCAGACAAAAATTTTATGGTGGTTCTATATCGGAGGGCTCTGAGTTACAAATAGAGGTTGCGGAGTTCTTTTGGAGGAATGTTCAGCTCAATGGAAGCCTGATCATTATAGCTGAAAATGTTATGGGCTCGATGAAGATTAATGAGAGTGGCGAATCCATACTACATTATGGGCAAAGGTGTGGAAGATGTAAATTACAGAATGTCAAGGTGTTGAACAAGGGTATTGATTGGAGTTATGGTGGAAATGTATACTGGAAACATGATGTGCAGCGGTCTGAGGTATTGCAGATCATACTGCATGGAAATGCTGAATTTGAGGCTACTGATGTTGTCTTACAGGGAAATCATGTATTTGAAGTTCCAGATGGCTACAAAATGAAAATCACACCAGGAAGCCCAGGTTTAGCAATCCAGTTGGATCCGATTGAACAGGGTATGATGGACAGTGGAAGCTGGCACTGGAATTACAAGATAGAAGGTTCTCACATTCAGCTAGAATTAGTAGAGTCATAG 2628 0.4444 MINSTSSILHHNNHFLFSFRSKASTSNSNSHSHLQSQPLSFANSLSLQPSTPSSSCCRVARVSTEALELSPPQPGFNFRLEIARLTALREELAGCVALEEKLRVIDADSRVRKFFGSHRRNGGFARILDALRLDSGDLFLLKCLVAAGQEHVLCLGEMTPLESPAAHAGSVKSALYALAEMIENWDSHNSNSGAGFGKTWTGMALEENEIRELNKLLETLAQIERFYDCIGGIIGYQITVLELLVQKLFERQNINWSQHMHEVKECQIMGINAPNGLDLSENTEYASQAALWGIEGLPDLGEIYPLGGSADRLGLVDPTTGECLPAAMLPYCGRTLLEGLIRDLQAREFLYFKLYGKQCITPVAIMTSSAKNNHKHITSLCERLHWFGRGQSTFQLFEQPLVPVVGAEDGQWVVTKPFIPLSKPGGHGVIWKLAHDNGIFKWFCCQGRKGATVRQVSNVVAATDLTLLALAGIGLRKGKKLGFASCKRIAGATEGINVLVEKRSLDGNWEYGVSCIEYTEFDKFGITDGPLAPKSLQVEFPANTNILYVDLPSAELVGSSKNENSLPGMVLNTRKPIVYADQFGRQCSVPGGRLECTMQNIADNYFNSYSSRCYNDVEDKLDTFIVYNERRRVTSSAKKKRRHGDKSLHQTPDGSLLDILRNAHDLLSQCEIRLPEIEANENYVDSGPPFLILLHPALGPLWEVTRQKFYGGSISEGSELQIEVAEFFWRNVQLNGSLIIIAENVMGSMKINESGESILHYGQRCGRCKLQNVKVLNKGIDWSYGGNVYWKHDVQRSEVLQIILHGNAEFEATDVVLQGNHVFEVPDGYKMKITPGSPGLAIQLDPIEQGMMDSGSWHWNYKIEGSHIQLELVES* 876
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g03936 875 FunFam UTP--glucose-1-phosphate uridylyltransferase 3 chloroplastic 200 662 - -
Rops11g03936 875 SUPERFAMILY Nucleotide-diphospho-sugar transferases 139 745 IPR029044 -
Rops11g03936 875 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 200 653 IPR029044 -
Rops11g03936 875 Coils Coil 203 223 - -
Rops11g03936 875 PANTHER UDP- GLUCOSE PYROPHOSPHORYLASE 71 802 IPR039741 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g03936 K22920 - gmx:100788781 1441.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops11g03936 11 73472842 73481307 Rops11g03936 11 73472842 73481307 ECH