Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g03934 ATGGAAAACTCAAAAGAAAGCAAAGAAGAAGTTCCATTCCCTCCAAACCCTAACAATGCCAATGCCGAAGAAGACGCTGACAACGACTCCATCGAAGAAGAGCAAGAAGACGAAGAAGAAGAAGAAGACGATGACGACGACGTCGTTTCGGGAGAACCAAATCACCGAAACCCCCAATCCCCATTATCCCGATTGCGGGAGCAGCGTTTCAAGCTGGAAACCCTATCCCGGCGATTATCATCGGAGCTAGTCCCTCTCCGAGTCCACGACGTTCTGATTCGCGGCAATACGAAGACCAAGGATTGGGTGATTGAAGCTGAGCTCAAGGGAATCCAAGATGCCACCACCATGCAGGAGCTTATTCGCGCTTCCGAAATCGCGCTCGCGAGGCTTCAGAGCCTCGGGATTTTCGATTCCACCAATCTCCGACTCGAGCCAGGGCCGCTGGAGTTGCCTGACACCGCCAATGTCATCGTCGACATCGTCGAGGCCGATAGCAAAGTCTCCGGTGAATTCGGCGTTTATACCAAACCCTCGACTAGTTCTTGGACTGCTGAAGGTGCTCTCAAGTACAAAAACTTGTTAGGTTATGGTGATCTATGGGATGCTTCTTTAGCCTATGGTGCCAACCAAGCAACAGAGGTGAGTGTAGGGGTGTACGCCCCTCGACTTAAAGGATTGTTAACTCCTCTTGTAGCACGACTATCCATGCTTTCCCAAGATTGGCAAGAGTTCTCTTCATACAAAGAGCAATTGTTGGGCATGTCTCTTGGCTTAATCTCAACAAAGCACCATGACTTAGTATACACTCTTGGATGGCGTACCTTAACAGATCCATCACAAATGTCATCCAGGTCTATAAGGAGGCAGCTTGGACATGGTTTACTATCATCTTTGAAGTATACATTTAAAATTGACAGGAGGAACTCACCAATTAGGCCTACAAGAGGATATGCTTTTCATTCTACCACTCACTTTGGTGGCCTTACACCAGATAATCGGAGCTTACGGTTTCTGCGTCAGGAGTTTGATGTTCGTTATGCTGTCCCCTTTGGGTTTTATAATACAGCACTGAACATTGGGCTTTCTGCTGGTGCTGTTTTTCCGTGGGGGCATGGTTTCATGAACAAGCCATCTCCCCTTCCTGAAAGGTTTTATTTGGGTGGTGATTTCTCTCCAGTTTGCACCCTAGGAGGGCCAATAACATTGTGGGGATTTAAAACTAGGGGATTAGGTCCTACTGAACCACGAAGACAAAGCAGAGATGAAATTAATGATGACAATAATGATTCCTCTAGATGGGATTTCGTTGGAGGAGATCTCGCTGTTACGGCTTTTGCAGACCTCTCTTTTGATCTTCCAGTTAGGTGGTTAAGAGAACATGGAATCCATGGCCATGTTTTTGCTGGTGCTGGGAATACTGCTAAATTGACTCAGTATGAATATAAGCACTTCTCTCCTCGAAAGTTCTTAGAATCCTTTCGAACATCAGTGGGATGTGGATTTGTTGTTCCTACTAGACTTTTCCGCCTAGAGGGTAACTTCTACTATGTACTTAAGCAGGATGAACATGATCGTGGGAAAACTGGATTTAGGTTCAGCTTCTCAGCTCCTTCTTAG 1620 0.4642 MENSKESKEEVPFPPNPNNANAEEDADNDSIEEEQEDEEEEEDDDDDVVSGEPNHRNPQSPLSRLREQRFKLETLSRRLSSELVPLRVHDVLIRGNTKTKDWVIEAELKGIQDATTMQELIRASEIALARLQSLGIFDSTNLRLEPGPLELPDTANVIVDIVEADSKVSGEFGVYTKPSTSSWTAEGALKYKNLLGYGDLWDASLAYGANQATEVSVGVYAPRLKGLLTPLVARLSMLSQDWQEFSSYKEQLLGMSLGLISTKHHDLVYTLGWRTLTDPSQMSSRSIRRQLGHGLLSSLKYTFKIDRRNSPIRPTRGYAFHSTTHFGGLTPDNRSLRFLRQEFDVRYAVPFGFYNTALNIGLSAGAVFPWGHGFMNKPSPLPERFYLGGDFSPVCTLGGPITLWGFKTRGLGPTEPRRQSRDEINDDNNDSSRWDFVGGDLAVTAFADLSFDLPVRWLREHGIHGHVFAGAGNTAKLTQYEYKHFSPRKFLESFRTSVGCGFVVPTRLFRLEGNFYYVLKQDEHDRGKTGFRFSFSAPS* 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g03934 539 Gene3D membrane protein fhac: a member of the omp85/tpsb transporter family 175 537 - -
Rops11g03934 539 Pfam Omp85 superfamily domain 193 536 IPR000184 GO:0019867
Rops11g03934 539 PANTHER SORTING AND ASSEMBLY MACHINERY SAMM50 PROTEIN FAMILY MEMBER 28 536 IPR039910 -
Rops11g03934 539 Coils Coil 21 41 - -
Rops11g03934 539 MobiDBLite consensus disorder prediction 25 48 - -
Rops11g03934 539 Gene3D membrane protein fhac 85 164 - -
Rops11g03934 539 FunFam Outer membrane OMP85 family protein 175 537 - -
Rops11g03934 539 FunFam Outer membrane OMP85 family protein 85 164 - -
Rops11g03934 539 MobiDBLite consensus disorder prediction 1 67 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g03934 K07277 - gmx:100785408 890.182
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops11g03934 11 73464757 73469440 Rops11g03934 11 73464757 73469440 ECH