Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g03933 ATGGCGAACGTTGATGAACTGTTATCTTGCATAATCTCAGACATCAACAACTACACAGGAAAAGACCCTCTTCTTCCTTGGCTCAGAGGGATCCGAAAGATGAAGGACACTCTTCCTCCCCAAACCCTCAACGATAAACTACCCGAATTCTTGCAAAAATGCGCACACACCTTCGAGCTCGATCGACGTTACAGAAACGACATGCGCTACCTTCGTGTTTGGCTCCACTTGATGGATTTTGTGGATGATCCAATTACACTTTTGAGAACCATGGAGGTTAATCATATTGGGACAAAACGTTGTCAATTTTATCAAGCTTATGCTCTTTACTATGAGAAGAACAAGAAGTATGATGAAGCAGAGAAAATGTATCATCTGGGTGTGAAGAACCTTGCAGAGCCTATGGATGAATTGCAGAAATCATATGAACAGTTTCTTCAACGCATGAAGCGAAAGAACAACAAGAGAATCCAGCATCAGGAAGGGAGAGCAGCCAGGAGGGCCCTTTCTGCAAAGAGCATCCCTCCTTTGGACAAGAAGACTGAGGGAAGCCATGGAACATGCAGTGTTGAGGGTGTACACATGGGACCCCAAATTGGGAGTTCTGTAACTAAAGATGTAGCTGATAATAGACATGTAAAGACTAAAAATGACGAGTGCAAGAGATTTCACGGTGATGATACAGTTGTAGTCAAGTTTGTTGGCACTGCCATGGATGGAAAGGCTGAAGCTGAAGATGCATGCCATCATGGACTGGTTGATCCTACAATAAATATGAAGGAGGCCATGAATGCCATAAACAGCATGTTCCGGGAGCCATTAGAAACTGTTCCATTGGCCAGGAAATCTCATAAAAACCATTCAAAAGAAGATCGTAGTACAAAGAACAACTTTGAAGTTTTTGTTGATGAAAATTTGGATAATGGAATCAAACCATCTGGTTCCTTATCATTTCAGCACAAGACTGAAGCTAGCCAACCTCACCAAGAGCCACTCCAGATATATATTGATGATGATGAAGGACATTCTGAGACCAGTGATGCAAATGTGAATTTGTCTGAAGGTTCTGCTTCATCAGCTTCACAACTAAATGGCTTTGTTTTTCTCCAACCTAAGGATCTTCCTTCTGAAAAATCTAGTGATATGGATATAGAAAGCTACCGTAATTCAAAATTCAGAGAGGATACAGTCGTTTGCAGATTTGTTGGTTCTGCCATTTCAGATGAACCAGAGGTGGAAAATGTTTGCCACCATGGTTTAGTAGATCCAACAATCAACATGAAGGAAGCTATGGATGACATAAATAACATGTTTGGGAAGCCAATAGATTTTGTTAGGAGAAAAAGATCAATGAAGCAGGAGAAGGCACCCGAGATCAATAGTGGAAAGGAATTTGGTGGGTTTTCAATCCTTGCTGATGATGACCCGGAACCACAACAAGGTCCACCACCACCACCAAAATTATCAGGAAAGTCAAAGGAATCTGATTTATTTGAGCCAACTCTCCTCACTAAGGAAGCCATGGACGACATAAACAAGATGTTTAATATGCCTCTGAATTTTTAG 1566 0.4144 MANVDELLSCIISDINNYTGKDPLLPWLRGIRKMKDTLPPQTLNDKLPEFLQKCAHTFELDRRYRNDMRYLRVWLHLMDFVDDPITLLRTMEVNHIGTKRCQFYQAYALYYEKNKKYDEAEKMYHLGVKNLAEPMDELQKSYEQFLQRMKRKNNKRIQHQEGRAARRALSAKSIPPLDKKTEGSHGTCSVEGVHMGPQIGSSVTKDVADNRHVKTKNDECKRFHGDDTVVVKFVGTAMDGKAEAEDACHHGLVDPTINMKEAMNAINSMFREPLETVPLARKSHKNHSKEDRSTKNNFEVFVDENLDNGIKPSGSLSFQHKTEASQPHQEPLQIYIDDDEGHSETSDANVNLSEGSASSASQLNGFVFLQPKDLPSEKSSDMDIESYRNSKFREDTVVCRFVGSAISDEPEVENVCHHGLVDPTINMKEAMDDINNMFGKPIDFVRRKRSMKQEKAPEINSGKEFGGFSILADDDPEPQQGPPPPPKLSGKSKESDLFEPTLLTKEAMDDINKMFNMPLNF* 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g03933 521 Gene3D - 10 167 - -
Rops11g03933 521 MobiDBLite consensus disorder prediction 453 500 - -
Rops11g03933 521 Coils Coil 135 155 - -
Rops11g03933 521 MobiDBLite consensus disorder prediction 154 202 - -
Rops11g03933 521 FunFam Mad3/BUB1 homology region 1 10 167 - -
Rops11g03933 521 ProSiteProfiles BUB1 N-terminal domain profile. 11 167 IPR013212 -
Rops11g03933 521 Pfam Mad3/BUB1 homology region 1 13 128 IPR013212 -
Rops11g03933 521 SMART mad3_bub1_i 4 128 IPR013212 -
Rops11g03933 521 PANTHER MITOTIC CHECKPOINT SERINE/THREONINE-PROTEIN KINASE BUB1 11 521 IPR015661 GO:0007094
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g03933 Rops-Chr11 73461161 73463605 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g03933 - - gmx:100806627 840.876
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops11g03933 11 73461161 73463605 Rops11g03933 11 73461161 73463605 ECH