Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g03926 ATGCTTCTCAGAGCTGCTTCCTCTTTCTCTCTCCTCAACGCCAACGGCGACCACCACCTACTCCCTCTGTTTTCCTCATCTTCCTCCGTCCTTCGTTACTCTCCCTGCAAAAATGGGAACAGCTTTGTTCCCTGTGCCGCCAAGGGCTCGAATAACCGTCCCTTAAGCGGTGTCGTTTTTGAACCCTTTGAAGAGGTAAAGAAGGAGCTCGACCTTGTTCCCACCGTCCCACAAGCTTCCCTTGCACGCCAGAAGTATGTTGATGAGTGTGAAGCTGCTGTTAATGAGCAAATCAATGTGGAGTACAATGTTTCGTACGTTTACCATGCAATGTTTGCCTACTTCGATAGGGACAATGTTGCGCTCAAGGGTCTTGCCAAGTTTTTTAAGGAGTCAAGTCAGGAGGAAAGGGAGCATGCTGAGAAATTGATGGAGTATCAGAACAAACGGGGTGGTAGAGTGAAGTTGCAGTCTATAGTGATGCCACTTTCTGAGTTTGATCATGTGGAAAAGGGAGATGCGCTATATGCAATGGAACTTGCTCTGTCATTAGAGAAGCTAACGAATGAAAAGCTCCTTAACTTGCACAATGTTGCTTCAAAGAACAATGATGTGCAGTTGGCAGATTTTGTTGAAAGCGAGTTTTTGGGTGAACAGGTGGAAGCCATTAAAAAAATCTCCGAGTATGTTGCTCAGCTCAGAAGAGTTGGCAAAGGACATGGTGTCTGGCACTTTGATCAGATGCTGCTCCATGAGGGAGTTGCTGCTTGA 771 0.4656 MLLRAASSFSLLNANGDHHLLPLFSSSSSVLRYSPCKNGNSFVPCAAKGSNNRPLSGVVFEPFEEVKKELDLVPTVPQASLARQKYVDECEAAVNEQINVEYNVSYVYHAMFAYFDRDNVALKGLAKFFKESSQEEREHAEKLMEYQNKRGGRVKLQSIVMPLSEFDHVEKGDALYAMELALSLEKLTNEKLLNLHNVASKNNDVQLADFVESEFLGEQVEAIKKISEYVAQLRRVGKGHGVWHFDQMLLHEGVAA* 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g03926 256 Gene3D - 53 253 IPR012347 -
Rops11g03926 256 FunFam Ferritin 53 253 - -
Rops11g03926 256 ProSiteProfiles Ferritin-like diiron domain profile. 84 237 IPR009040 -
Rops11g03926 256 PANTHER FERRITIN 63 251 IPR001519 GO:0006826|GO:0006879|GO:0008199
Rops11g03926 256 CDD Euk_Ferritin 88 247 - -
Rops11g03926 256 SUPERFAMILY Ferritin-like 78 251 IPR009078 -
Rops11g03926 256 ProSitePatterns Ferritin iron-binding regions signature 1. 135 153 IPR014034 -
Rops11g03926 256 ProSitePatterns Ferritin iron-binding regions signature 2. 204 224 IPR014034 -
Rops11g03926 256 Pfam Ferritin-like domain 92 236 IPR008331 GO:0008199
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g03926 Rops-Chr11 73399622 73402078 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g03926 K00522 - gmx:547476 425.246
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops11g03926 11 73399622 73402078 Rops9g00798 9 12439537 12441854 ECH
Rops11g03926 11 73399622 73402078 Rops11g03926 11 73399622 73402078 ECH
Rops11g03926 11 73399622 73402078 Rops9g00798 9 12439537 12441854 PCT