Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g03924 ATGTCCAACCCAAATTCCGAGGTTGAACCTCAACCCTCTGCTTCCGAAGCTCCACCACCCTTTGATCCAACACAACCCTCAATACCCATTTCATATCCAATCAAGACCCTTAAGGAACTTGAGTCTCGCTCCTATTTTGAGTCCTTTCACTATCCTTTTAACAAAGCTTCTGTTCCCATCACTCTCAATGGGTTCTCTTCTTCGTTGCCCAATAGGAGAAGATCACTTGTGTGTCATGATATGGCTGGTGGTTACTTGGATGATAAGTGGATTCAAGGTGGCAATAATCCTGATGCTTATGCAATTTGGCATTGGCATTTGATCGATGTGTTTGTTTACTTTTCACACAACCTTGTTACTCTTCCTCCTCCTTGTTGGACTAACACTGCTCATCGCCATGGTGTTAAGGTGTTGGGGACTTTCATCACTGAATGGGATGAGGGAAGGGCTGCCTGTGATGTACTGCTTGCAACAAAGGAGTCTGCACATATGTATGCAGAACGTCTGGCAGAGCTTGCTGTTGAATTGGACTTCGACGGGTGGCTACTAAATATGGAGGTAGATTTGGATCTGAAGCAAATTCCTAATTTGAAAGAATTTGTAGATCATTTGTCATCAACCATGCATTCATCTATGCCTGGATCATTAGTGATATGGTATGACAGTGTTACAATTGATGGTAAACTGAACTGGCAAAATCAACTAAACCAATATAATAAGCCATTCTTTGATATATGTGATGGAATATTTGTAAACTATACATGGAAGGAAGACTATCCAAGGCTCTCTGCTGCTGTTGCTGGTGATCGGAAATTCGATGTGTACATGGGAATTGATGTATTTGGAAGGAACACATATGGTGGTGGACAATGGAATACAAGTGCTGCTCTTGATGTGGTAAGAAAGAATGACATCTCTGCCGCAATATTTGCTCCTGGATGGGTCTATGAGACAAAGCAAGCACCAGATTTTGAGACTGCTCAAAATAGGTGGTGGGGTCTTGTGGAAAGGTCATGGGGAATACTGCGAAATTTTCCTAGCAAGCTACCATTCTATACAAATTTTGATCAGGGGCGCGGTTATCATATTTCGGTTGATGGAGACAATGAATCAGATGCTACTTGGAACAACATTTCTTGCCAAGGCTTTCAGCCACTTCTTGGGTTTGCTGATCCTACAAATTCTATTCAAGTTCTTGTAGACTTGAAGGAAGCATCATATAATGGAGGGAGTAACATTACATTCAAAGGATCTCTTGAAGATCAAACTTACTTTGAGAGGAAAATCTTTCAAGGAGAGTTTCTTTTGAACGAGTTTCCTATCCACTTTATTTATTCTGTGAAATCTGATGGCAATTCTTCATTGGGACTCAAGCTTGTGTTCTCTTCCACCGTCCACGGAAGAATTACTGTACTTCTTACATCTCGGGCAGTGAATCATTTCTCAAGCAAATTCAGCAAAGTAATCATGACACGTGAACATAAGGGAATTTCCCCTGGATGGGTTATAAATGAAGGTTCAATTGCTATGAAAGGATTCACCTTAACAGAAATCCATGCAGTGTGCTATAGATCAAAGTCTCCTTTCAATTGCTATGAATGGTTCAATTGCTCTGATGGTACTGTAGCTTCTCCATCAGATTATTTTGCACTTCTTGGTCATGTAACACTCAAGACTTCTGAATATAAGACATATTTTCCCGTCTCTTCTTCTTGGCTGGTTGATGGCAAATACATAAAATGGACATCAGATTCTCAGGGTTCAAAGACCCTTGACATTAAAATTTCTTGGACACTGAAAGATGGAAAGAATTATCTGTTTCCAAAGTACAACGTGTATTTGGTGAAATTACCAAAACAAGCGGGTGGTAATCCAGGTACAACATTAGAACAGGTGAAGGAGTACCTTGGAGTTGCACAAGTAAACTGTTTTTATGTTTCTGACCTTAAAGTTCCTTTGGGCACTTCTAGTCTCAAATTTATAATACAAGTCTGCAATGTTGATGGAACAATTCAGGGATTGGATGAGTCTCCATATTATCAATTGGATGTTGAAGATGCCTAA 2064 0.4021 MSNPNSEVEPQPSASEAPPPFDPTQPSIPISYPIKTLKELESRSYFESFHYPFNKASVPITLNGFSSSLPNRRRSLVCHDMAGGYLDDKWIQGGNNPDAYAIWHWHLIDVFVYFSHNLVTLPPPCWTNTAHRHGVKVLGTFITEWDEGRAACDVLLATKESAHMYAERLAELAVELDFDGWLLNMEVDLDLKQIPNLKEFVDHLSSTMHSSMPGSLVIWYDSVTIDGKLNWQNQLNQYNKPFFDICDGIFVNYTWKEDYPRLSAAVAGDRKFDVYMGIDVFGRNTYGGGQWNTSAALDVVRKNDISAAIFAPGWVYETKQAPDFETAQNRWWGLVERSWGILRNFPSKLPFYTNFDQGRGYHISVDGDNESDATWNNISCQGFQPLLGFADPTNSIQVLVDLKEASYNGGSNITFKGSLEDQTYFERKIFQGEFLLNEFPIHFIYSVKSDGNSSLGLKLVFSSTVHGRITVLLTSRAVNHFSSKFSKVIMTREHKGISPGWVINEGSIAMKGFTLTEIHAVCYRSKSPFNCYEWFNCSDGTVASPSDYFALLGHVTLKTSEYKTYFPVSSSWLVDGKYIKWTSDSQGSKTLDIKISWTLKDGKNYLFPKYNVYLVKLPKQAGGNPGTTLEQVKEYLGVAQVNCFYVSDLKVPLGTSSLKFIIQVCNVDGTIQGLDESPYYQLDVEDA* 688
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g03924 687 MobiDBLite consensus disorder prediction 13 27 - -
Rops11g03924 687 Gene3D - 347 498 - -
Rops11g03924 687 FunFam cytosolic endo-beta-N-acetylglucosaminidase 23 344 - -
Rops11g03924 687 Gene3D Glycosidases 24 342 - -
Rops11g03924 687 MobiDBLite consensus disorder prediction 1 27 - -
Rops11g03924 687 CDD GH85_ENGase 76 394 - -
Rops11g03924 687 Pfam Glycosyl hydrolase family 85 85 362 IPR005201 GO:0005737|GO:0033925
Rops11g03924 687 PANTHER ENDO BETA N-ACETYLGLUCOSAMINIDASE 11 681 IPR032979 GO:0033925
Rops11g03924 687 FunFam Cytosolic endo-beta-N-acetylglucosaminidase 1 isoform A 348 530 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g03924 Rops-Chr11 73358674 73364731 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g03924 24 685 Glycoside Hydrolase AT5G05460 54.260 0.0 719
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g03924 K01227 - gmx:100804658 1134.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops11g03924 11 73358674 73364731 Rops11g03924 11 73358674 73364731 ECH