Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g03916 ATGCCTTATTCTCTTCAGCTAGAGAGATTCAATCCTAGCACCGACGCCACCGTCACCACCGCCATATCCAACGGTATAAACTGCCCAAAGCAACCTCAAACACCGCCACCCACGGCGGCGCGTCGTCTCGTGGTGCCACTTCCGGTGTCTCTCTATTCAATCGGAGGAAGCGTCGTCCCGGAAAGCGTGGCTCGCCACCACGAGCACATGGTGGGGCCCAACCAGTCTTGTTCCGTCATGACCCAACCCATCGATGCCCCCGTCTCCGCCGTGTGGCCGGTGGTTCGGCGCTTCGACAACCCTCAAGGATACAAGAACTTCGTGAAGAGCTGCCACGTCATCACCGGCGACGGCATTAACGTAGGAGCCGTCCGTGAGGTCCACGTGGTGTCTGGCCTCCCCGCCGAGTCGAGCATGGAGCGGTTGGAGATCCTCGACGACGAGCGCCACGTCATCAGTTTCAGCGTTGTCGGCGGTGACCACCGTTTGAGTAATTACCGGTCGGTGACAACCCTTCACGCCAATGGGAACGGAACACTTGTTATTGAGTCTTACGTTGTTGACATACCACAAGGTAACACGAAGGAGGAAACGTGCGTGTTTGTTGACACAATCGTACGTTGTAATTTGCAGTCGTTGGCTCAGATCGCTGAGAATATGACCAGGAATTCTGAGCAACGTTAA 684 0.5599 MPYSLQLERFNPSTDATVTTAISNGINCPKQPQTPPPTAARRLVVPLPVSLYSIGGSVVPESVARHHEHMVGPNQSCSVMTQPIDAPVSAVWPVVRRFDNPQGYKNFVKSCHVITGDGINVGAVREVHVVSGLPAESSMERLEILDDERHVISFSVVGGDHRLSNYRSVTTLHANGNGTLVIESYVVDIPQGNTKEETCVFVDTIVRCNLQSLAQIAENMTRNSEQR* 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g03916 227 Gene3D - 45 227 IPR023393 -
Rops11g03916 227 PANTHER - 80 218 - -
Rops11g03916 227 FunFam Abscisic acid receptor PYL4 44 227 - -
Rops11g03916 227 SUPERFAMILY Bet v1-like 78 216 - -
Rops11g03916 227 CDD PYR_PYL_RCAR_like 81 218 - -
Rops11g03916 227 Pfam Polyketide cyclase / dehydrase and lipid transport 79 218 IPR019587 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g03916 Rops-Chr11 73273081 73273764 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g03916 K14496 - gmx:100808416 343.969
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops11g03916 11 73273081 73273764 Rops9g00795 9 12384680 12385312 ECH
Rops11g03916 11 73273081 73273764 Rops11g03916 11 73273081 73273764 ECH
Rops11g03916 11 73273081 73273764 Rops9g00795 9 12384680 12385312 PCT