Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g03908 ATGGAGTCCTCCGCTGCCATTCGATCCTTTCACTATCCCATTGGCACTATGTCCTATATGCGATCCTCACTTGATAAGCCAGCTGTAGTTCCCTGCCATAATGTCAGATGGAACTCTAGAAGTATGCTTTTCACCCAGCATTTGGCATATGGCCAGAGGCACATTAATTCTCACACCAAGGGGAAGAAAACAGTAGTGTCATGCTCAAAAACAGTTGAAGCTATCAACACAACCAAGTCTGATGCTTCTTCAGATAGCACTCCACAAGACTCATCAGAGAAAAAGCCTTTTCAAACTGCTACTTTTCCTAATGGATTTGAGGCTTTGGTATTAGAGGTCTGTGATGAGACTGAAATCGCTGAACTGAAAGTAAAGGTTGGAGAGTTTGAGATGCATCTTAAGCGAAACATTGAAGCAACAAAAGCTCCTTTGTCTAACATTTCACCAACTACACCACCACCTATTCCAAGTGAACCTATGGATGAATCAGCAGCTGGTACCCCACAACCATCGCCACCAAAATCATCTCCAGAAAAGGTCAACCCATTTGCAAATGTTTCCTCGCAGAAGTCATCAAAGTTGGCAGCATTGGAGGCTTCTGGTACTAATACCTATGTCTTAATATCATCTCCTACGGTTGGCTTATTCCGAAGAGGTAGAACAGTGAAAGGGAAGAGACAACCTCCTATCTGTAAAGAGGGTGATGTAATCAAAGAAGGTCAAGTCATAGGGTATTTGGATCAATTTGGCACTGGACTTCCTGTTAAGTCAGATGTGGCTGGAGAAGTATTAAAGCTACTTGTTGAGGATGGAGAGCCTGTTGGTTATGGAGACCCTCTTATTGCTGTCTTGCCATCATTCCATGACATCAAGTGA 876 0.4326 MESSAAIRSFHYPIGTMSYMRSSLDKPAVVPCHNVRWNSRSMLFTQHLAYGQRHINSHTKGKKTVVSCSKTVEAINTTKSDASSDSTPQDSSEKKPFQTATFPNGFEALVLEVCDETEIAELKVKVGEFEMHLKRNIEATKAPLSNISPTTPPPIPSEPMDESAAGTPQPSPPKSSPEKVNPFANVSSQKSSKLAALEASGTNTYVLISSPTVGLFRRGRTVKGKRQPPICKEGDVIKEGQVIGYLDQFGTGLPVKSDVAGEVLKLLVEDGEPVGYGDPLIAVLPSFHDIK* 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g03908 291 SUPERFAMILY Single hybrid motif 201 282 IPR011053 -
Rops11g03908 291 Gene3D - 203 283 - -
Rops11g03908 291 PANTHER IS A MEMBER OF THE PF|00364 BIOTIN-REQUIRING ENZYMES FAMILY-RELATED 33 291 - -
Rops11g03908 291 MobiDBLite consensus disorder prediction 78 99 - -
Rops11g03908 291 Pfam Biotin-requiring enzyme 224 281 IPR000089 -
Rops11g03908 291 CDD biotinyl_domain 208 283 - -
Rops11g03908 291 MobiDBLite consensus disorder prediction 142 187 - -
Rops11g03908 291 FunFam Biotin/lipoyl attachment domain-containing protein 204 283 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g03908 Rops-Chr11 73094931 73104516 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g03908 208 285 Acyl Lipid Metabolism Gene Families AT5G15530 30.769 6.79e-08 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g03908 - - gmx:100792471 482.256
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops11g03908 11 73094931 73104516 Rops11g03908 11 73094931 73104516 ECH