Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g03906 ATGAAGCTCAACGCTCATGCTTCCTTCGCCACTCACGTGACCTCCTCACGTGCCGCGCCATCGGAGACTCGTCTTCCCCACGCCGCCGGCTATCATGAATTCCGGCGCGTTTGGATTTCGAAACGCCGCCGTTTCAACTTATCCTCCCGCTGCTCGAATCGCGTAATCGCCGCGGCGTGGAAACCCGAACATTCTGACCGGAACGACTCGGTTGAACGCGTCGAGCCACGATGCAACCGGCGAGGCGTGCTGGTGGCGCCGTTTCTGGCAGTTGGCGCGTCGGTTCTGCTCTCTACAGCGGCGACAACGAGGGCGGAAGAGAAATCTCCGTCGTCGTCGCCTTCGCCGGCGGATTTGACGGTTTTGAAACCGGAGGAGCAGAAGAAGAAGATGGAGGAGGAAGTGGAAGTGATAACGTCGAGGATTTACGACGCGACGGCGATAGGGGAACCTTTGGCGATAGGGAAAGAGAAAGGGAAAGCGTGGGAGAAGTTGATGAATGCTCGAGTGGTTTATTTAGGGGAAGCGGAACAGGTTCCAGTTCGTGATGATAAGGAATTGGAGCTTGAGATTGTGAAGAATTTGCATAGGCGTTGTGTTGAGAAAGATAAGCGATTATCTTTGGCTCTTGAAGCTTTTCCCTCTAATCTCCAAGAACCGCTTAATCAGTATCTGGATAAAAAGATGGATGGAGAAACCTTGAAGTCTTATACAGTGCATTGGCCGCCTCAAAGATGGCAGGAGTATGAACCTCTTCTTAGTTACTGTCGTGAAAATGGTATTCGTCTTGTTGCTTGTGGTACTCCACTGACGATCCTAAGGACTGTCCAAGCAGAAGGAATTCGTGGACTTACTGTGGCTGAACGTAAACTATATGCACCTCCAGCTGGTTCAGGCTTCATATCAGGCTTTACTTCTATCTCACGTAGATCTTTCGTTGATAGTACTCCAAATCTATCTTTTCCTTTTGGTCCAAGCTCATATCTATCTGCACAGTCTAGAGTAGTTGAGGAGTATACTATGTCCCAGATCATATTACAAAATGTGCTTGATGGAGGAGCTACTGGTATGTTAGTAGTTGTGACTGGTGCAAGCCATGTTACATATGGATCTCGAGGAACTGGAGTGCCAGCAAGAATTTCAGGAAAATTACAAAAGAAAAACCAAGTAGTTGTACTACTTGACCCTGAAAGACAGTTCATTCGCAGAGAGGGAGAAGTTCCTGTTGCTGATTTTTTGTGGTATTCTGCTGCCAGACCCTGTAGTAGAAATTGCTTTGACCGTGCTGAGGTTGCTCGGGTAATGAATGCTGCTGGGCGGAGGCGAGATGCCCTCCCACAGGATCTTCAAAAGGGAATTGATCTTGGTTTAGTATCACCAGAGGTGTTGCAGAACTTCTTTGATCTAGAGCAGTATCCACTGATTTCAGAACTCACTCACAGTTTTAAGGGTTTCAGGGAAAGATTGTTGGCAGATCCCAAATTCTTGCATAGATTAGCCATAGAAGAAGCTATATCAATAACAACTACATTATTAGCACAGTATGAAAAGCGGAAAGAAAACTTTTTTCAAGAGCTTGACTATGTTATTACGGACACTGTCAGAGGATCTGTTGTTGATTTCTTTACAGTGTGGCTTCCTGCACCAACTTTGTCATTCCTTTCATATGCTGATGAGACGAATGCGCCTCAGAACATTAATTCTCTAATAGGTCTTCTTGGCTCCATCCCAGACAATGCATTTCAAAAGAATCCAGCAGGGATAAACTGGAATCTCAATCATCGAGTTGCATCTGTTATATTTGGTGGTTTAAAACTAGCTAGTGTTGGATTCATTTCAAGCATTGGAGCTGTTGCTTCATCAAATTCTCTGTATGCAATGCGTAAATTCCTTAATCCAGCAGTTGTTACTAATCAACGGATTGTAAGGTCACCGATACTGAAAACAGCAGTTGTTTATGCATGCTTTCTTGGAATATCTGCAAATCTCCGCTATCAGATAATTGCTGGGATAGTGGAGCATCGTCTTTCTGAACAGTTTTCTTCCCAAACTTTTCTTGTAAATATGCTATCTTTTGTCGCACGGACAGTTAATTCTTATTGGGGAACCCAGCAATGGATTGACCTTGCACGCTTCACCGGACTGCAAGTTAGAAAGACAGAGTCAACTACATCAGATTCTCCAAATCATGCTGCAATTTTATGTAACCAAACAGAAGAAGCCGGCATCGATGAGATTAAAGAGTAA 2247 0.4517 MKLNAHASFATHVTSSRAAPSETRLPHAAGYHEFRRVWISKRRRFNLSSRCSNRVIAAAWKPEHSDRNDSVERVEPRCNRRGVLVAPFLAVGASVLLSTAATTRAEEKSPSSSPSPADLTVLKPEEQKKKMEEEVEVITSRIYDATAIGEPLAIGKEKGKAWEKLMNARVVYLGEAEQVPVRDDKELELEIVKNLHRRCVEKDKRLSLALEAFPSNLQEPLNQYLDKKMDGETLKSYTVHWPPQRWQEYEPLLSYCRENGIRLVACGTPLTILRTVQAEGIRGLTVAERKLYAPPAGSGFISGFTSISRRSFVDSTPNLSFPFGPSSYLSAQSRVVEEYTMSQIILQNVLDGGATGMLVVVTGASHVTYGSRGTGVPARISGKLQKKNQVVVLLDPERQFIRREGEVPVADFLWYSAARPCSRNCFDRAEVARVMNAAGRRRDALPQDLQKGIDLGLVSPEVLQNFFDLEQYPLISELTHSFKGFRERLLADPKFLHRLAIEEAISITTTLLAQYEKRKENFFQELDYVITDTVRGSVVDFFTVWLPAPTLSFLSYADETNAPQNINSLIGLLGSIPDNAFQKNPAGINWNLNHRVASVIFGGLKLASVGFISSIGAVASSNSLYAMRKFLNPAVVTNQRIVRSPILKTAVVYACFLGISANLRYQIIAGIVEHRLSEQFSSQTFLVNMLSFVARTVNSYWGTQQWIDLARFTGLQVRKTESTTSDSPNHAAILCNQTEEAGIDEIKE* 749
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g03906 748 PANTHER PROTEIN RETICULATA-RELATED 2, CHLOROPLASTIC-RELATED 39 747 - -
Rops11g03906 748 MobiDBLite consensus disorder prediction 102 126 - -
Rops11g03906 748 CDD ChanN-like 169 393 IPR007314 -
Rops11g03906 748 SUPERFAMILY EreA/ChaN-like 160 416 - -
Rops11g03906 748 Gene3D - 154 419 - -
Rops11g03906 748 MobiDBLite consensus disorder prediction 102 118 - -
Rops11g03906 748 Pfam Haem-binding uptake, Tiki superfamily, ChaN 162 380 IPR007314 -
Rops11g03906 748 Pfam Protein RETICULATA-related 487 671 IPR021825 -
Rops11g03906 748 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g03906 Rops-Chr11 73079947 73086364 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g03906 - - gmx:100810366 1191.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops11g03906 11 73079947 73086364 Rops11g03906 11 73079947 73086364 ECH