Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g03905 ATGTCAACCTCATCATCTTCCCACCAAAGCTTGAAAATTGGCATAGTTGGGCTCGGCACCTTTGGCCAATTTCTGGCAAAGACAATGAAAAAACAAGGCCACACTATCACAGCAACTTCTCGAACAGATTACTCTGAACTCTGTCTCCAAAAGGGCATTCATTTTTTCAGGGATGTCAGCGCATTCCTTGATGCCGAGATGGATGTCACACTGCTATGCACATCCATCTTGTCACTATCTGAGGTTGTCGGGTCAATGCCACTCACTCGTTTGAAGCGTCCAACGCTCTTTGTTGATGTCCTTTCAGTCAAAGAGCACCCAAGGGACCTTCTATTACGAGTGTTGCCAGAGGATTGTGACATACTCTGCACCCACCCAATGTTTGGACCAGTGAGCGGGAAGGATGGGTGGAAAGATCTGACTTTCATGTATGAGAAAGTACGAATACGAGATGAAGCTACCTGCTCTAAATTTCTCCAAATTTTTGCAAGTGAGGGTTGCAAGATGGTACAAATGTCCTGTGAGGAACATGATAAAGCAGCAGCGAAGAGCCAATTTATAACACACACAATAGGCAGGACAATGGCAGAAATGGATATCAAATCCACACCTATTGACACCAAGGGCTTTCGGGCACTTGTTCAATTGAAGGAGACTACAACGGGATGTAGTTTTGATCTGTATAGTGGATTATTCATGCATAACAGATTCGCCAGACAAGAGCTGGAAAACCTTGAACATGCCTTGTACAAAGTCAAAGAGATGCTGGTTCAAAGGATGAATGAGGAGCAGGGTCCAGAAAGAACTGACAGTTGA 816 0.4461 MSTSSSSHQSLKIGIVGLGTFGQFLAKTMKKQGHTITATSRTDYSELCLQKGIHFFRDVSAFLDAEMDVTLLCTSILSLSEVVGSMPLTRLKRPTLFVDVLSVKEHPRDLLLRVLPEDCDILCTHPMFGPVSGKDGWKDLTFMYEKVRIRDEATCSKFLQIFASEGCKMVQMSCEEHDKAAAKSQFITHTIGRTMAEMDIKSTPIDTKGFRALVQLKETTTGCSFDLYSGLFMHNRFARQELENLEHALYKVKEMLVQRMNEEQGPERTDS* 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g03905 271 ProSiteProfiles Prephenate/arogenate dehydrogenase domain profile. 11 271 IPR003099 GO:0004665|GO:0006571|GO:0008977
Rops11g03905 271 Pfam Prephenate dehydrogenase, nucleotide-binding domain 25 140 IPR046826 GO:0070403
Rops11g03905 271 SUPERFAMILY 6-phosphogluconate dehydrogenase C-terminal domain-like 173 258 IPR008927 -
Rops11g03905 271 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 9 172 IPR036291 -
Rops11g03905 271 Gene3D - 1 178 - -
Rops11g03905 271 Coils Coil 235 255 - -
Rops11g03905 271 PANTHER AROGENATE DEHYDROGENASE-RELATED 4 263 IPR045011 GO:0006571|GO:0033730
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g03905 Rops-Chr11 73074668 73076551 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g03905 K15227 - gmx:100810896 439.113
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops11g03905 11 73074668 73076551 Rops11g03905 11 73074668 73076551 ECH