Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g03900 ATGGGGAAATCACTTGAATCTGTGGCGAGGCTGCAACAATTATCGCGGGTTGTATCATCTGCAAAGCCCCATAGGCCAAAGGGAACGCAACCCAGATCGGTGAACCGGGTTGTTGCCACCCCACCACGAACCGCGAAACCAGGTGGTTCTGTTAAGGTTGAATCAGCTAAGAAGATGGAAGCTTTGGAAGGGGAGCAATGTCGGACACCCCTCGCCAAGGTGGTCACCGATTGCGCGAAACGGTGGTTCCAGGATACGCTCAAGGAGGCCAAGGCTGGGGACAGTGCAATGCAGGTTCTGGTTGGTCAAATGTATTACACTGGCTATGGTGTTCCTAGAGATCCTCATAAGGGACATGCTTGGATTAGTAAAGCATCAAGAAGTCGAAGTTCAGTTTGGAAAGTAAGCGATAAACATCCGGGTTACAGAGCGAGTGATTCAGATTCATGTGAATTGGTGAACAAATCTTCTCGTTAA 477 0.4948 MGKSLESVARLQQLSRVVSSAKPHRPKGTQPRSVNRVVATPPRTAKPGGSVKVESAKKMEALEGEQCRTPLAKVVTDCAKRWFQDTLKEAKAGDSAMQVLVGQMYYTGYGVPRDPHKGHAWISKASRSRSSVWKVSDKHPGYRASDSDSCELVNKSSR* 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g03900 158 Gene3D Tetratricopeptide repeat domain 49 137 IPR011990 GO:0005515
Rops11g03900 158 SMART sel1 95 130 IPR006597 -
Rops11g03900 158 MobiDBLite consensus disorder prediction 15 52 - -
Rops11g03900 158 MobiDBLite consensus disorder prediction 116 158 - -
Rops11g03900 158 SUPERFAMILY HCP-like 85 126 - -
Rops11g03900 158 MobiDBLite consensus disorder prediction 131 145 - -
Rops11g03900 158 PANTHER EXPRESSED PROTEIN 1 155 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g03900 - - gmx:100779520 224.942
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops11g03900 11 73033863 73040026 Rops11g03900 11 73033863 73040026 ECH