Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g03897 ATGTCTCAATTCTCCACTCTGAACTGTTTATCAGTGCTCAAGTGTAGTCCAATATCAGGTGGAGATAACTACCTGGCACAAGACTCTGATTCCAGCAATAAGAAGCTGGTTCTCGCCCTTTATGACGCCTTGAACTTTCGAGATTCTGAAACCGTGGTTAAGATCGTGGCACCTGATCTCGAGTGGTGGTTCCATGGTCCACCTTCTCATCAGTTTTTGATGCGCATGCTCACCGGCGATTCCTCCGTCGGCGACGATTCCTTCCGATTCATTCCCCAATCACTCGCCTCCTTCGGTTCCTACGTCATCGTTGAAGGTTGTGACACCTCACGCGCCATTTCTTGGGTTCACGCGTGGACCGTCGCGGATGGGATAATCACCCAGGTTAGGGAGTACTTCAACACTTCCCTCACCGTCACGCGTATCGCCGATTCCAACGCCGGCGTCGTCTCGTCGGAGATTGTTCCGGCGGCGTCTCATTCCGGTCGCTTCCCTTGCGTTTGGGAGAGTAGCGTGTCCAATCGGGTCGGGAAATCCGTGCCCGGTTTGGTCCTCGCAATATAA 564 0.5319 MSQFSTLNCLSVLKCSPISGGDNYLAQDSDSSNKKLVLALYDALNFRDSETVVKIVAPDLEWWFHGPPSHQFLMRMLTGDSSVGDDSFRFIPQSLASFGSYVIVEGCDTSRAISWVHAWTVADGIITQVREYFNTSLTVTRIADSNAGVVSSEIVPAASHSGRFPCVWESSVSNRVGKSVPGLVLAI* 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g03897 187 Gene3D - 22 154 - -
Rops11g03897 187 PANTHER OS07G0691300 PROTEIN 26 187 IPR009798 -
Rops11g03897 187 Pfam Wound-induced protein WI12 74 187 IPR009798 -
Rops11g03897 187 SUPERFAMILY NTF2-like 31 138 IPR032710 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g03897 Rops-Chr11 72926714 72930144 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g03897 - - lja:Lj0g3v0040339.1 251.906
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops11g03897 11 72926714 72930144 Rops11g03897 11 72926714 72930144 ECH