Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g03892 ATGCGCGCCATAGCAACTCAGCTCTCTAACTATTTATTTAGAAGAAGAACTTGGGTCAATATGCGATCTCGTAATTTCTCATCATATAATGGCAAAGATGAGCTATCTATTGAGGAAGAAGCTGAGAGAAAAGTAGGGTGGTTATTGAAGACGCTATTTTTTGGGACCGCAGCTTACGCGGGATACCAGTTCTTTCCTTACATGGGGGAAAATTTGATGCAACAGTCCATAGCACTTTTGCGTGTCAAGGATCCTTTGTTTAAAAGGATGGGAGCTTCTAGATTGGCTCGTTTTGCAATAGATGATGAAAGAAGGATGAAGATAGTTGAGATGGGTGGGGTTGAAGAGCTCTTAAATATGTTAAGCACGGCTAAAGATGACCGTACACGGAAAGAAGCATTGAACGCTCTTGCTGCATTGTCACACTCAGATGAAGTTCTTGCATCCTTGCACCGTGCTGGGGCTATTTCAATCATTAGGTCTGCACCAAATTCACTTGAGGATGCAGATGTTGAGAAATTCAAGTTGAGCTTGATGAAAAGGTTCCAAGATCTGAGGTATGATATGTCATCATGA 576 0.4184 MRAIATQLSNYLFRRRTWVNMRSRNFSSYNGKDELSIEEEAERKVGWLLKTLFFGTAAYAGYQFFPYMGENLMQQSIALLRVKDPLFKRMGASRLARFAIDDERRMKIVEMGGVEELLNMLSTAKDDRTRKEALNALAALSHSDEVLASLHRAGAISIIRSAPNSLEDADVEKFKLSLMKRFQDLRYDMSS* 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g03892 191 SUPERFAMILY ARM repeat 77 165 IPR016024 -
Rops11g03892 191 Gene3D - 5 171 IPR011989 -
Rops11g03892 191 SMART arm_5 101 142 IPR000225 GO:0005515
Rops11g03892 191 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 1 188 - -
Rops11g03892 191 Pfam Armadillo/beta-catenin-like repeat 102 138 IPR000225 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g03892 - - gmx:100527372 315.464
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops11g03892 11 72901844 72904415 Rops11g03892 11 72901844 72904415 ECH