Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g03874 ATGGCTGAAAGTCGCGAAGCTGTTGCAGATGTTGTTCCCGGAACACCTGCTATAAGGGAAGTGAGACCCGAAACTGGGACCCAGAGACTCGATTCAGAAATCGGGTCGGGTGGGAACCCGATTCATGGGATCAGGAGGGTGAATTTTCGAGCTGAGATTGATACTTCGCCACCTTTCGGGTCGGTTAAGGAGGCCGTGACCCGTTTCGGAGGTAGCGGGCCTTGGATACCACTTTATAAGCTTGGAGAGGCTTTTAACAACTTTGAAGATTTTGACATAAAAAAAGTGGAAGAACAGGCAGCAGAGTTGGAGAAGGATTTGATAGTCAAAGAACTTGAAACACTTGATGTGCTTGAAGAACTTGGAGCTACCAAAAGGATCGTGGAGGACTTAAAGCAGCAGCTACAAAAAGAGGCAATGAAATGTTTTGCAACTCAAGATGTAAATTCTAGTGAACAAGTTGGAGCTGCTGTTATTAAGGAGATGAATAAGGAAAATTGTGGAAATGATGTCGACAATCAAGAACAGATATTGCAAATTCCAAGTGCCTGCCCCATGTCATCACCTGATCTGATTTTAATGGAGTTGAAACAAGCCAAAGTGAATCTTGGTAAAACTATAAATGAACTCGGGGTGATTCAATCCTCTGTTGAATCTTTGAATAAGAAGATGAAGAAGGAGAAAATTTTTCTGGAGAGGACGCGTGAAAAGCTAGCATCAAAGTTTGCAGCAGTCTCTACTCAAGAGAGGGCCCAAGAGCAAACAAGATTGAATCCACCACCAGCTCATGCAGAATGCACTTTTGATAATCCTGCAAATACTATGAGGAATTTCAATCCTGATTCTGAGCAGCACAATAGAATGGTTGAAACAAGAAGACCAGAAGTTTCAAAGCCCATATCAGTGTATGAAGAGCATGGGTTTAGTGTTAAGACTGCTGAGATGAGGTGGCTTGCAGCTAAAAAGATGGAAGAAGCTGCAAGAGCAGCAGAAGCTATTGCTCTTGCTGAAATCAAGGCTCTATCTAGTGCTGAGAGATTACCAGAATTTGCTCTGCCAGAAACTGAGAAAGTCACTTTTGCTTTAGCACCACGCTCTCCTCTAAATCCTAAGGCTGAAATACCTGAGGAGTCAACCCTGAAGAATGTAATAGATTCCAAGCTTCAAATTGATGAAACAAATATTTCTAAACTGACTATTTTGAAGAAGTTGAAGGAGGCAACAGAAGAAATTCTTCACAGCAAACAAGTCTTGACAGATGCTTTAAATAGAGTTGAAACTGCAAACAAAAAGCAACATGCTGTGGAGGAGGCTTTCCGGAGATGGATTCCAGAGAATGATCTGAAGGAGCAAGCAGTGTATAATTCTATTAATTGCAACAAGTTTAATCAACCTGGAATTTGTCAAGATTCTCCTCTACCAGATGTAACAAGGTCAACAACAGCAAAAAATAATCCAAAGCCTGTTTTAAGGCCCACAATTTCAATGAGAGATGTACTTAGCAGAAAGCAAGTTCCTGAAGGATATGCTACAAGAAAGGAGATGGAAGAGCACACAGAAAGACAAAAGGTAGCATTGAGCCAAATGCTTAGAGCATTGAGGGAAGATCTAACTCTTCCTCCAAAAGCTGAGAAAGATGGGAGTGATCAAAAGCAGTTTGTTTCACAAAGGAAGAAGTTTGGGTTCATCCAAATATCACTACCCTTGACAAGGCCAAGCAAGAAAAGGGCATGA 1734 0.4164 MAESREAVADVVPGTPAIREVRPETGTQRLDSEIGSGGNPIHGIRRVNFRAEIDTSPPFGSVKEAVTRFGGSGPWIPLYKLGEAFNNFEDFDIKKVEEQAAELEKDLIVKELETLDVLEELGATKRIVEDLKQQLQKEAMKCFATQDVNSSEQVGAAVIKEMNKENCGNDVDNQEQILQIPSACPMSSPDLILMELKQAKVNLGKTINELGVIQSSVESLNKKMKKEKIFLERTREKLASKFAAVSTQERAQEQTRLNPPPAHAECTFDNPANTMRNFNPDSEQHNRMVETRRPEVSKPISVYEEHGFSVKTAEMRWLAAKKMEEAARAAEAIALAEIKALSSAERLPEFALPETEKVTFALAPRSPLNPKAEIPEESTLKNVIDSKLQIDETNISKLTILKKLKEATEEILHSKQVLTDALNRVETANKKQHAVEEAFRRWIPENDLKEQAVYNSINCNKFNQPGICQDSPLPDVTRSTTAKNNPKPVLRPTISMRDVLSRKQVPEGYATRKEMEEHTERQKVALSQMLRALREDLTLPPKAEKDGSDQKQFVSQRKKFGFIQISLPLTRPSKKRA* 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g03874 577 MobiDBLite consensus disorder prediction 473 488 - -
Rops11g03874 577 Coils Coil 86 113 - -
Rops11g03874 577 PANTHER HEAVY CHAIN, PUTATIVE, EXPRESSED-RELATED-RELATED 51 151 - -
Rops11g03874 577 Coils Coil 118 138 - -
Rops11g03874 577 MobiDBLite consensus disorder prediction 1 39 - -
Rops11g03874 577 Pfam Weak chloroplast movement under blue light 194 446 IPR008545 -
Rops11g03874 577 Pfam Weak chloroplast movement under blue light 51 147 IPR008545 -
Rops11g03874 577 Coils Coil 221 241 - -
Rops11g03874 577 MobiDBLite consensus disorder prediction 470 489 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g03874 Rops-Chr11 72698686 72702242 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g03874 - - gmx:100776514 834.328
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops11g03874 11 72698686 72702242 Rops9g00763 9 12008303 12011486 ECH
Rops11g03874 11 72698686 72702242 Rops11g03874 11 72698686 72702242 ECH
Rops11g03874 11 72698686 72702242 Rops9g00763 9 12008303 12011486 PCT