Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g03871 ATGTCTTGCCACCGTTCATCAACAGTGGCTGCTGCAGTTGTGTTGTTATGGCATGCTATTGTGTTCCTTGTTGTTTCAAATTTGGCTTCTGCTTCAAGCTTTAATGCCACAAACAGACATGAGGTAATTGTTGCCGATCATGGAGCTGTTGCCACGGATGACCGTAGATGTTCAAGGATTGGGATGGAGGCTCTCCGTGAAGGAGGGCATGCTGTGGATGCAGCTGTGGCTGCTGCTCTTTGTTTGGGGGTTGTTAGTCCAGCTTCAAGTGGCCTTGGTGGTGGAGCCTTTATGGTTCTCAGGTTAGGTAATGGGGAAGCAAAAACATTTGATATGAGAGAAACTGCTCCTATTCTAGCTTCCAAGAATATGTATGGTGGCGATGCTACTTTGAAGGCAAAAGGTGGCTTGTCTGTGGCAGTCCCTGGAGAACTTGCTGGCCTTCACAAGGCTTGGAAACAACATGGGAAGCTTCCATGGCAGAGACTTGTAAAGCCAGCTGAGATTCTTGCTCGTAGAGGGTTTAAGGTATCACCATACCTCCGCATGCAGATGGAAAGAACAGAGTCAGATATATTGAAAGACACGGGTCTTCGCAGTGTATTTGCACCAAATGGAATACTCTTGAAGAAAGGTGCCACATGCTACAATAAGAAACTAGCAGACACTCTCAGAACAATAGGCAAGTTAGGTCCACAAGCCTTCTATGGTGGATTGATTGGCCTTAATTTAGTTAAAGATGTTCAAAAAGCTGGAGGGATATTGACCATGAAAGACCTCAAAAGATACACTGTTAAACAGAAGGAACCCATATCTACAGATGTTCTTGGACTAAAAATCATTGGCATGCCTCCCCCTTCAGGTGGGCCTCCAATGATGTTGCTGCTGAATATTCTGGCTCAATATGAGCTCCCTTCTGGCCTTTCTGGCGCCCTTGGGGTCCATAGAGAAATTGAAGCTTTGAAACATGTATTTGCAGTGAGAATGAATCTTGGTGATCCTGACTTTGTAAATGTAACTGGGGTTCTTTCTGATATGCTTTCTCCTAAGTTTGCTAAAGTGCTGAAAAAAGACATCAACGATCGTAGGACTTTTGGTCCTAGTCATTATGGTGGCAGGTGGAATCAGATCCATGATCATGGTACAAGTCATGTAAGCATAATAGATGTTGAGAGAAATGCCATTTCCATGACCACCACAGTAAATGCATATTTTGGTTCAACGATCCTTTCACCAAGTACAGGAATAGTACTGAACAATGAGATGGATGATTTTTCCATGCCTAGAAATGTCACCAAGGATGTTCCACCACCAGCTCCTGCCAATTTCATCATGCCAGGGAAACGGCCATTATCATCCATGTCACCAACTATTGCCCTCAAGGATGGGAAACTGAAAGCTGTATTAGGTGCAAGTGGAGGAGCTATGATCATTGGGGGAACTTCAGAGGTTCTTTTGAATCACTTTGTCAAAGGAATGGATCCTTTTTCTTCTGTAACGGCTCCAAGGGTCTATCATCAGCTGATACCTAATGTGGTTAATTATGAGAATTGGACAACTGTAAACGGTGAACACTTTGAACTTGCTGCTGATATCAGAGCAGCCCTTAGAAGTAAAGGTCATGTCCTACAAGGCCTTGCTGGTGGGACTATTTGCCAATTTATTGTTCTAGACATTGAGCCTTCAGGAAAAAATGAAGGTTCAGCTGCAACAACTGATGATAATGGTCGGAGGAGGCTTCAGCTTCCAGCATTTGATTACAAGCCACAGACATACAAAGGACCATTGGTCGATGAAGTTTTAGCCAAACGGAACAAGTTTCTGGGTCCTTCATTGTTCCACTACTATCATAAACCTAGTAAACTCCAACAGCATGCTACCACTATATATCTACACCATGCAATAGCTGATTTTGCAGAGGCCCTGGCATCCAAAATGCCTGGAAACCTTAAGGGAGCTGGAGGAGCAGTTGAGCTGGTACCTGGGTACTTAAAACTGATCTATGATATTGTACACAAAGCTGGTGGTGTCTGCATTGCTGATGAAGTGCAATGTGGGTTTGGTCGCACAGGCCATTATTGGGGATTTGAGACACAGGGTGTCATTCCTGATATAGTTACCATGGCAAAGGGTATTGGCAACGGTTTGCCATTAGCAGCTGTAGTTACAACTCCAGAAATAGCAAGTGTGATGGCTCAGAAGATTCAATTAAATACTTTTGGTGGGAATCCTGTATGTTCCGCTGGGGGACTTGCAGTGCTCAGGGTTCTTGATAAGCAGAAGCGTCAATCTCATTGTGTTGATGTTGGTTCTCACTTGCTTGAGCGTTTGAGATCTCTGATGCAAATACATGAAATCATTGGAGATGTGAGGGGAAGAGGCTTAATGGTGGGGATTGAGTTTGTTACTGATAGAAAAGAGAAGACCCCTGCAAAGGCTGAAACAGCGATTTTGCATGAAAGACTTAGAGGGCTCGGTATACTAATTGGGAAAGGTGGGCTGCATGGAAATGTTTTTAGGATTAAGCCACCAATGTGTTTCACCAAAGATGATGCAGGAGACATACACCACGCACAGAATGAGACAATTGTTCCATCTAACCTTACTACACACCAAGACCAAGACCAGAATTTGATTGAGTCTAATACATTAGAAAACTGA 2661 0.4382 MSCHRSSTVAAAVVLLWHAIVFLVVSNLASASSFNATNRHEVIVADHGAVATDDRRCSRIGMEALREGGHAVDAAVAAALCLGVVSPASSGLGGGAFMVLRLGNGEAKTFDMRETAPILASKNMYGGDATLKAKGGLSVAVPGELAGLHKAWKQHGKLPWQRLVKPAEILARRGFKVSPYLRMQMERTESDILKDTGLRSVFAPNGILLKKGATCYNKKLADTLRTIGKLGPQAFYGGLIGLNLVKDVQKAGGILTMKDLKRYTVKQKEPISTDVLGLKIIGMPPPSGGPPMMLLLNILAQYELPSGLSGALGVHREIEALKHVFAVRMNLGDPDFVNVTGVLSDMLSPKFAKVLKKDINDRRTFGPSHYGGRWNQIHDHGTSHVSIIDVERNAISMTTTVNAYFGSTILSPSTGIVLNNEMDDFSMPRNVTKDVPPPAPANFIMPGKRPLSSMSPTIALKDGKLKAVLGASGGAMIIGGTSEVLLNHFVKGMDPFSSVTAPRVYHQLIPNVVNYENWTTVNGEHFELAADIRAALRSKGHVLQGLAGGTICQFIVLDIEPSGKNEGSAATTDDNGRRRLQLPAFDYKPQTYKGPLVDEVLAKRNKFLGPSLFHYYHKPSKLQQHATTIYLHHAIADFAEALASKMPGNLKGAGGAVELVPGYLKLIYDIVHKAGGVCIADEVQCGFGRTGHYWGFETQGVIPDIVTMAKGIGNGLPLAAVVTTPEIASVMAQKIQLNTFGGNPVCSAGGLAVLRVLDKQKRQSHCVDVGSHLLERLRSLMQIHEIIGDVRGRGLMVGIEFVTDRKEKTPAKAETAILHERLRGLGILIGKGGLHGNVFRIKPPMCFTKDDAGDIHHAQNETIVPSNLTTHQDQDQNLIESNTLEN* 887
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g03871 886 PRINTS Gamma-glutamyltranspeptidase signature 254 270 - -
Rops11g03871 886 PRINTS Gamma-glutamyltranspeptidase signature 156 175 - -
Rops11g03871 886 PRINTS Gamma-glutamyltranspeptidase signature 470 487 - -
Rops11g03871 886 PRINTS Gamma-glutamyltranspeptidase signature 283 302 - -
Rops11g03871 886 PRINTS Gamma-glutamyltranspeptidase signature 70 95 - -
Rops11g03871 886 PRINTS Gamma-glutamyltranspeptidase signature 382 400 - -
Rops11g03871 886 PRINTS Gamma-glutamyltranspeptidase signature 446 461 - -
Rops11g03871 886 PRINTS Gamma-glutamyltranspeptidase signature 138 156 - -
Rops11g03871 886 PRINTS Gamma-glutamyltranspeptidase signature 406 424 - -
Rops11g03871 886 Pfam Aminotransferase class-III 627 855 IPR005814 GO:0008483|GO:0030170
Rops11g03871 886 Pfam Gamma-glutamyltranspeptidase 63 570 - -
Rops11g03871 886 NCBIfam gamma-glutamyltransferase 50 540 IPR000101 GO:0006751|GO:0036374
Rops11g03871 886 Gene3D - 641 760 IPR015421 GO:0003824
Rops11g03871 886 Gene3D - 270 374 IPR043138 -
Rops11g03871 886 Gene3D Aspartate Aminotransferase, domain 1 761 853 IPR015422 GO:0003824
Rops11g03871 886 SUPERFAMILY PLP-dependent transferases 608 859 IPR015424 -
Rops11g03871 886 Gene3D - 377 577 IPR043137 -
Rops11g03871 886 PANTHER GAMMA GLUTAMYL TRANSPEPTIDASE 10 545 IPR000101 GO:0006751|GO:0036374
Rops11g03871 886 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 39 567 IPR029055 -
Rops11g03871 886 ProSitePatterns Aminotransferases class-III pyridoxal-phosphate attachment site. 678 715 IPR005814 GO:0008483|GO:0030170
Rops11g03871 886 FunFam Gamma-glutamyltransferase 5 isoform 1 270 374 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g03871 Rops-Chr11 72669112 72678716 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g03871 20 567 Miscellaneous Gene Families AT4G39640 65.880 0.0 736
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g03871 K18592 - gmx:100797040 915.99