Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g03860 ATGGAATCGGATTCTCCCAGATCCGAATCCCAAACGGATCCGCTCCGAAACAACTCCGAGGAGCTTTGCCACGACCTCGCTTCCCTCCAAGACCTAGCCAACCGCGGTGCATGGCGTTCCATCATCGACAAAGTCTCACGCGCCAGAGCCCTCTCTCTCCTCCAAAAGCCCCACGATCACCTCACCTACCTCGCCTTCAACGCCCTCGCCTTCACAAAACTACGTCGTTTCAACGAAGCATCCTCCGAACTCGATTCCCTTGAAGATCTAAACAGTTCTCACTACAGGTACGAAACCTACCCGAAAATTTACCCTAATCGGGTCGGATCCATGGTCCCTTTTTCCCTCCGATGGCTCCATGCCCTAATCCCAATAAGATTAGGTCAACGCCAACAAGGGATGGATCGATTGTACAATCTCCTCGATTTCGTGCGCGAGAAGATTAAGGAAAAGGAAAAGGAAAAGAACAACAACCTCGAAGTTTCCCTTAATTTGTGGAGAAAAAGAGAGGTTTTTGTTGTGAATTGTATAATAGGGCAACATTTGAGTCACAAAGAGTTTGGTGTGTGTTTGAGCTTAATGAAGGATCTTCTTTCTCGTGATTTTTCTGACCCATTTTTGGTTTCTCAACTTGGGTACATTCAATTGCAAATTGGTGACTTGGAAGGTGCCAAAGTTTCGTTTTTTAAGGTAGAGAATGAGGTGAAGAATAATGGGTCGTTGAGTGAGGTTGAGTTTCAGAATCTTGTGAATAGAAACAAGGCCTTGGTGTATATGGTTGGGAAGGATTATGTATCTGCTGTGAGGGAATATGAAGAGTGCATTGAGAGGGATAATGCTGATATAGTGGCTATTAACAATAAGGCTCTTTGTTTGATGTATCTAAGGGATTTGTCTGATTCTATTAAGGTGTTGGAAAATGCACTTGAAAGGGTTCCTACTGTGGCTTTGAATGAGACCCTTGTTGTCAATTTGTGTAGTATGTACGAGTTGGCTTATGTTAATCACTCTGATACTAAGAGAACGCTTAGTAGTTGGATTGCTCGTGTTGCCCCTGATGACTTTGATTCAACTTGTACTCGTACATGA 1089 0.4408 MESDSPRSESQTDPLRNNSEELCHDLASLQDLANRGAWRSIIDKVSRARALSLLQKPHDHLTYLAFNALAFTKLRRFNEASSELDSLEDLNSSHYRYETYPKIYPNRVGSMVPFSLRWLHALIPIRLGQRQQGMDRLYNLLDFVREKIKEKEKEKNNNLEVSLNLWRKREVFVVNCIIGQHLSHKEFGVCLSLMKDLLSRDFSDPFLVSQLGYIQLQIGDLEGAKVSFFKVENEVKNNGSLSEVEFQNLVNRNKALVYMVGKDYVSAVREYEECIERDNADIVAINNKALCLMYLRDLSDSIKVLENALERVPTVALNETLVVNLCSMYELAYVNHSDTKRTLSSWIARVAPDDFDSTCTRT* 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g03860 362 Gene3D Tetratricopeptide repeat domain 180 338 IPR011990 GO:0005515
Rops11g03860 362 FunFam Trafficking protein particle complex subunit 12 173 344 - -
Rops11g03860 362 SUPERFAMILY TPR-like 195 317 IPR011990 GO:0005515
Rops11g03860 362 SMART tpr_5 282 315 IPR019734 GO:0005515
Rops11g03860 362 SMART tpr_5 248 281 IPR019734 GO:0005515
Rops11g03860 362 SMART tpr_5 205 238 IPR019734 GO:0005515
Rops11g03860 362 Coils Coil 134 169 - -
Rops11g03860 362 PANTHER D-ALANYL-D-ALANINE CARBOXYPEPTIDASE 8 360 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g03860 K20309 - gmx:100779691 598.586
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops11g03860 11 72513974 72515915 Rops11g03860 11 72513974 72515915 ECH