Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Rops11g03849 | ATGGCAACCCCAACAAGGTTCCTCGCTCTCCTCTTTCTGCTCTCACTATGCCTCACCGGAACCGTTAGATCTGATGAAGATTGTGTGTACACGGTTTACGTTAGGACCGGGTCGATCATCAAGGGAGGGACCGATTCCATAATCGGGCTCAAGTTGTACGATCAATATGGCTACTACATATACATAACCAACTTGGAGGCGTGGGGCGGGTTAATGGATCCGGGTCATGATTACTTCGAACGGGGCAACCTTGACATATTCAGTGGAAGGGCACCTTGTTTGGATGGACCCGTTTGTGCGGTGAACTTGACTTCAGACGGGTCGGGTCCCCATCATGGGTGGTATTGTAATTACGTGGAGGTGACCTCTACCGGGGTGCACAAAGCCTGTGTTCAGGAGCAGTTCACGGTGGAGCAGTGGCTGGCTACGGACACATCGCCCTATCAGTTATGGGCCGTGAGGAACTATTGCAAGTACGACTTGGGCCAGGCCCGTCCTAAACCTAAGGTCACTGAGGCTGTCAGATCTGGGTCTGGGTCTGGGTCGGGTTTCTCTATTTTGGACTCCACCGTCCGTGTGTAG | 582 | 0.5292 | MATPTRFLALLFLLSLCLTGTVRSDEDCVYTVYVRTGSIIKGGTDSIIGLKLYDQYGYYIYITNLEAWGGLMDPGHDYFERGNLDIFSGRAPCLDGPVCAVNLTSDGSGPHHGWYCNYVEVTSTGVHKACVQEQFTVEQWLATDTSPYQLWAVRNYCKYDLGQARPKPKVTEAVRSGSGSGSGFSILDSTVRV* | 194 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Rops11g03849 | 193 | CDD | PLAT_plant_stress | 28 | 155 | - | - | |
| Rops11g03849 | 193 | SUPERFAMILY | Lipase/lipooxygenase domain (PLAT/LH2 domain) | 29 | 146 | IPR036392 | GO:0005515 | |
| Rops11g03849 | 193 | Gene3D | PLAT/LH2 domain | 19 | 147 | - | - | |
| Rops11g03849 | 193 | Pfam | PLAT/LH2 domain | 30 | 148 | IPR001024 | GO:0005515 | |
| Rops11g03849 | 193 | PANTHER | PLAT DOMAIN-CONTAINING PROTEIN | 25 | 169 | - | - | |
| Rops11g03849 | 193 | ProSiteProfiles | PLAT domain profile. | 28 | 155 | IPR001024 | GO:0005515 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Rops11g03849 | Rops-Chr11 | 72322246 | 72322919 | Dispersed/Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Rops11g03849 | - | - | adu:107469134 | 302.367 |